Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00939 ATGGGAGAAGTGGGTGAAGCTCAATATTTCAGATCAGAAATAGCTCTTTTGAATTACTCAGATGTGACTTTCAAACCCCCACTCTCTCCTCTCTTGATCCACATTGATTCGTTCACACCAAGTGGTTCTTCTCCCTCACAAGCTCATCCATCTCCCACTTCTCAGGATCAGCACCCCAAAGACGCATGGCTTCCCATCACTGAATCAACAAATGGGAATGCCTGTTATGCAGCCTTCCATGTTCTCAATTCCAATATTGGATTCCAGGCTCTCATGCTTCCCGTTGCTTTCGCCACTCTTGGTTGGGCATGGGGCACAGTATGCTTGACAGTAACATTCATTTGGCAGCTCTATGCCATATTTATTCTTATTCAACTTCACGAATCTGTCCCTGGAATTCGTCACAGCAGATACCTCTTCCTCGCCATGGCTGCCTTCGGTAAAAGGTTGGGGAAGGTGGCAGCATTATTCCCGGTAATGTACCTTTCAGGGGGCACATGCGTCATGCTCATCATCACCGGCGGTGGGACCCTCAAACTATTATTCAAGACACTATGCGAAAATGGAAACACTTGCAGTGCCCACGCACTTACCGGGACTGACTGGTTCTTGGTCTTCACCTGTGTGGCCATTCTCATTGCACAGTTGCCAAACCTCAACTCCATGGCCATGGTTTCTCTCGTCGGAGCTGTTACCTCCATTACTTATTGCACCCTCTTTTGGGCTCTCTCTGTTAAGAAGGGAAGGCCCAATAACGTATCATATACCTCAACCCTGTCCCAAGAATCCACTGCGCTGGCCAACATCACTGACGTTCTCAATGCAGTTGGAATCATCGTCCTAGCTTACAGAGGTCATAATGTTTTGCTCGAGATACAGGGGACGCTGCCTTCAAATTGCGAACGAACTTCCAAAGAACCAATGCGCAGAGGAGTGAGTATGTCATATGTGCTGATTTCCATGTGTGTCTTTCCCCTTGCAATTGCCGGATTCTGGGCGTATGGAAACCAGGCAAGATTACCAGAAATCGATCAATATTCCCAGATCTCGAACGGTTTTTTATTCGATGGATTAACTAATAATGAGTTTATGTGGTTTTTGAAGATAAACGATGGTGGATTGTTCTATTCGTTCCCGCAGTTACACAAGAAGCAAATAACGAAATTCTCCATGGGAGCAATATACGTTCTGGTAATAATACATTGTTTGAGCAGCTACCAAATCTATGCGATGCCGGTTTTTGACAACCTTGAGATAAGATACACGAGCATAAAGAACAAGAAATGCTCACCACTCGCAAGAACATGCATACGCTTATTTTTCGGGGGATTGACATTTTTTATAGCAGTCACATTCCCATTCCTGCCAAGGCTATCAGCACTAATTGGAAGCATGACCCTGGTGCCAATCACGTATGCATACCCCTGCTTCATGTTTCTATCCCTGAAGAAGCCTCGACCAAGAGGTTTGGTTTGGTGCTTCAACGCTGCACTCGGGTGCTTAGGGTTGCTTCTCAGTGCTCTTTTGGTAGCTGCAGCTGCAAAGACTCTAGCTGATAATGGCTTAAATGCTAACTTCTTCCAACCATAA 1590 0.4579 MGEVGEAQYFRSEIALLNYSDVTFKPPLSPLLIHIDSFTPSGSSPSQAHPSPTSQDQHPKDAWLPITESTNGNACYAAFHVLNSNIGFQALMLPVAFATLGWAWGTVCLTVTFIWQLYAIFILIQLHESVPGIRHSRYLFLAMAAFGKRLGKVAALFPVMYLSGGTCVMLIITGGGTLKLLFKTLCENGNTCSAHALTGTDWFLVFTCVAILIAQLPNLNSMAMVSLVGAVTSITYCTLFWALSVKKGRPNNVSYTSTLSQESTALANITDVLNAVGIIVLAYRGHNVLLEIQGTLPSNCERTSKEPMRRGVSMSYVLISMCVFPLAIAGFWAYGNQARLPEIDQYSQISNGFLFDGLTNNEFMWFLKINDGGLFYSFPQLHKKQITKFSMGAIYVLVIIHCLSSYQIYAMPVFDNLEIRYTSIKNKKCSPLARTCIRLFFGGLTFFIAVTFPFLPRLSALIGSMTLVPITYAYPCFMFLSLKKPRPRGLVWCFNAALGCLGLLLSALLVAAAAKTLADNGLNANFFQP* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00939 529 MobiDBLite consensus disorder prediction 40 63 - -
Lapu11g00939 529 PANTHER OS05G0424000 PROTEIN-RELATED 74 504 - -
Lapu11g00939 529 Pfam Transmembrane amino acid transporter protein 72 338 IPR013057 -
Lapu11g00939 529 Pfam Transmembrane amino acid transporter protein 389 512 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00939 Lapu-Chr11 11852020 11855924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00939 58 529 Organic Solute Cotransporters AT1G47670 47.034 3.47e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00939 K26385 - gmx:100793408 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00939 11 11852020 11855924 Lapu11g00939 11 11852020 11855924 ECH