Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00936 ATGAAGCTCATACAGCTACCTGCTCTATCCAGTTTGTGTTCCATTTTGCTGCTTTTGGAATTGGTTTATGTTGCTGCGGAAGACCCTTATAGATTCTTCGACTGGACCATTACCTACGGCGACATTTATCCCTTAGGAGTTAAACAACAGGGTATTTTGATCAATGGTCAATTCCCAGGCCCTGAAATATACTCTGTCACCAATGACAATTTGATCATCAACGTACACAATAACTTGAACGAGTCGTTTCTTCTATCATGGAATGGTGTTCAACAAAGGAGAAATTCATATCAAGATGGAGTTTATGGAACCACATGCCCCATCCCTCCAGGCCAGAACTTCACCTACACACTTCAAGTCAAAGATCAAATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGTTTTGGAGCAATCAAAATCCTTAGCAGGCCAAGGATCCCAGTTCCATTTCCAGACCCAGCTGGTGATTTCAGTCTTCTCATAGGAGATTGGTACCAAATCAATCACAAGAAGCTTCAAAGTGTTCTAGATTTTGGACATAGACTTCCGTTGCCTCAAGCCGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAGTTGAACAAGGGAAAACATATAGGCTTAGAATATCAAATGTTGGACTTCAAAACACACTCAACTTTAGGATTGAAGGCCACAACATGAAGTTGGTGGAAGTTGAGGGAACTCACACCTTACAAACCACGTATTCCTCGTTAGATGTTCACGTGGGACAGTCTTATTCTGTGCTTGTCACCGCTGATCAAGCACCCAGAGACTACTACATTGCGGTGTCCACTCGTTTCACTGACAAGATCATCACAAGCACTGCCATCCTTCACTACAGTAACTCCCGACAATCTGTTTCTGGCCTAATTCCTGGTGGCCCAACCGATCAAATTGAATGGTCCATCGAACAAGCTCGTTCAATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCCTACCATTATGGTTTAATTAACGTTAGCAGGACAATTACATTGGTGAGCTCGACAGCACAAGTGAATAGGAAGCAGAGATATGCAGTGAACAGTGTATCATTCATACCAGCTGACACTCCTTTGAAGCTCGCTGATTACTTCAAGATTGGTGGGGTTTTCCAAGTTGGAAGCATCCCAGATAGCCCTTCTCGTAAACCCATGTATCTTGACACCTCAGTCATGGGTGCTGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAGAACCACGAAAACATTGTCCAGAGCTGGCACATTGACGGATACTCGTTTTGGGTTGTAGGAATGGATGGTGGTGTGTGGACACCTGAAAGTCGTAACCAGTACAACCTTAGAGATGCAGTATCAAGGTGCACAACACAGGTGTATCCCAAGTCATGGACTGCAATTTACATGGCACTAGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCACGACAGTACCTTGGACAACAATTCTATATGCGAGTGTATTCACCAGTTGGATCCATCAGGGACGAATACCCAATTCCCAAAAATGCTCTTCTCTGTGGCAAAGCAGCAGGGAGAACAAGTAGATGA 1629 0.4426 MKLIQLPALSSLCSILLLLELVYVAAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLNESFLLSWNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSLLIGDWYQINHKKLQSVLDFGHRLPLPQAVLINGRPNGTTFTVEQGKTYRLRISNVGLQNTLNFRIEGHNMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQAPRDYYIAVSTRFTDKIITSTAILHYSNSRQSVSGLIPGGPTDQIEWSIEQARSIRTNLTASGPRPNPQGSYHYGLINVSRTITLVSSTAQVNRKQRYAVNSVSFIPADTPLKLADYFKIGGVFQVGSIPDSPSRKPMYLDTSVMGADFRAFVEIVFQNHENIVQSWHIDGYSFWVVGMDGGVWTPESRNQYNLRDAVSRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSPVGSIRDEYPIPKNALLCGKAAGRTSR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00936 542 SUPERFAMILY Cupredoxins 157 336 IPR008972 -
Lapu11g00936 542 FunFam L-ascorbate oxidase homolog 30 151 - -
Lapu11g00936 542 Gene3D - 30 151 IPR008972 -
Lapu11g00936 542 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
Lapu11g00936 542 Gene3D - 345 540 IPR008972 -
Lapu11g00936 542 CDD CuRO_3_AAO_like_1 377 498 IPR034275 GO:0005507
Lapu11g00936 542 CDD CuRO_1_AAO_like_1 32 147 IPR034273 GO:0005507
Lapu11g00936 542 FunFam Monocopper oxidase-like protein 161 334 - -
Lapu11g00936 542 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Lapu11g00936 542 Pfam Multicopper oxidase 164 298 IPR001117 -
Lapu11g00936 542 SUPERFAMILY Cupredoxins 21 177 IPR008972 -
Lapu11g00936 542 Pfam Multicopper oxidase 381 515 IPR011706 GO:0005507|GO:0016491
Lapu11g00936 542 PANTHER MULTI-COPPER OXIDASE 49 512 IPR045087 -
Lapu11g00936 542 Gene3D - 161 334 IPR008972 -
Lapu11g00936 542 FunFam Monocopper oxidase-like protein 346 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00936 Lapu-Chr11 11834955 11838998 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00936 - - gmx:100818914 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00936 11 11834955 11838998 Lapu11g00936 11 11834955 11838998 ECH