Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00935 ATGGGGAGCGTTTCGTCCGAAGACGGTTCCGACCAGCAGAGCGACCGCTGCGGCAGCTACAGCCTCAGCGCTGACATCAGCGAGTCCGATAGTTGTGGGAGTTTCTCCGCCCGCCGCTTTGACGCCGAGGGAGCTTCCAGCTCCGCCAACCTCTCGCCGCGTCCAGCCGCCTCTCACTTCAACTTCCCGCCGCCGCAGGTAATGCTTCCCGTCATTGGCGGCAAGGACGTCGTCGTTTGGGATCACAAGCGCGACCTCGATCTGTCCGAAGTGGAAATGATGAAGGAGCGGTTCGCCAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTGTGCACTGCGCTTGCAATCTCCAATGCTATAACTAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTGGAGCCGCTGGCACCACAGAAGAAGGCAATGTGGCGTAGGGAAATGGAGTGGCTGCTATGTGTGAGTGATTCCATCGTGGAGCTGGTGCCATCTGTGCAGCAGTTTCCCGGGGGTGGAACCTATGAGGTGATGGCGACGCGTCCTCGCTCGGATTTGTATATCAATCTTCCTGCTCTGAAAAAGCTTGATGGGATGCTGCTTAGTATGCTTGATGGGTTTCACGACACGCAGTTTTTGTACGTTGATCGGGGAATCATATTGGGTGATTCCAAGGATTGTGATGCCTACGGTAGACCATCGGTTAGGCAGGAGGAGAAATGGTGGCTTCCCTCTCCCAAGCTACCCCCAAATGGCTTGTCCGAGGAAAATAGGAAGAGGTTGCAGCAATGTAGGGATTGCACCAATCAGATACTAAAAGCTGCTGTCGCAATTAATACTTCTGTGATTGCTGAAATGGAAATTCCCGGCGCGTATGTAGAGTCCTTGCCCAAGAATGGAAAGGCTTGTCTAGGGGATATAATTTATCGATACATAACTGCAGACCAGTTCTCACCTGAATGTCTGCTTGATTGCTTGGATCTTTCGTCAGAGCACCACACTCTGGATGTAGCTAATAGAATTGAGGCTGCGATACATGTGTGGAGGCTGAAGGACCATAAGAAACATTTAGGTTCTGCAAAGGCTAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAAAAGAATAAGAATAATTTTCTTGCCCAACGGGCTGAGACACTTCTGGAAAGCTTGAAACACCGATTTCCGGGGCTCCCTCAGACTGCACTAGATATGGCCAAAATTCAATATAATAAGGATGTTGGACAGTCTATCCTTGAAAGTTATTCAAGAGTGATGGAGAGCTTGGCCTTTAACATAATGGCCAGGATTGATGATGTCCTTTATGTAGATGATAGTATAAAGCGATGTGCGGCTGCAGATTCTCTCTCATTGTTCAGCCGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGAGATTCTCTCCTAGTCCCTTCTCAATTCAACACACCCCATATGCCTCCCCATTTGCAACACCAACGTTTTGTTCCTCCTCTCCTGTTACTGGGAGCCCTTGTAGTCCTGCAAGGATACATGATATGAAGAGAAATGCTCCAAAGGAGGGTGCAGATTCGAAGGCAGACAAATTGGCTAAGTCTGAGTTTGAGAGAGTTTGGTCATATGCCGGAAACCTCAGTGCAAGAAGAACGTCTGGTGATGCTCCAGAAAGAGACTGA 1701 0.5015 MGSVSSEDGSDQQSDRCGSYSLSADISESDSCGSFSARRFDAEGASSSANLSPRPAASHFNFPPPQVMLPVIGGKDVVVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFLYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEENRKRLQQCRDCTNQILKAAVAINTSVIAEMEIPGAYVESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDVANRIEAAIHVWRLKDHKKHLGSAKARRSWGGKVKGLVADSEKNKNNFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSSPVTGSPCSPARIHDMKRNAPKEGADSKADKLAKSEFERVWSYAGNLSARRTSGDAPERD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00935 566 FunFam Rop guanine nucleotide exchange factor 1 82 322 - -
Lapu11g00935 566 Gene3D PRONE domain, subdomain 1 324 463 - -
Lapu11g00935 566 Gene3D PRONE domain, subdomain 1 81 323 - -
Lapu11g00935 566 ProSiteProfiles PRONE domain profile. 81 463 IPR005512 GO:0005085
Lapu11g00935 566 MobiDBLite consensus disorder prediction 1 32 - -
Lapu11g00935 566 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 457 IPR005512 GO:0005085
Lapu11g00935 566 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 31 489 IPR038937 GO:0005085
Lapu11g00935 566 MobiDBLite consensus disorder prediction 514 537 - -
Lapu11g00935 566 FunFam Rop guanine nucleotide exchange factor 14 323 462 - -
Lapu11g00935 566 FunFam Rop guanine nucleotide exchange factor 7 291 419 - -
Lapu11g00935 566 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00935 Lapu-Chr11 11829143 11832797 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00935 - - gmx:100819455 1097.03