Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00931 ATGGGAGAACAGGGTATTTGGAAAGGTGCTACAAAGCAAGGGGTCAACCCCGGGAAGGCTACTATATTAGCTCTTGGCAAGGCTTTCCCTCATCAGCTTGTCATGCAAGATTATTTAGTTGATGGATATTTCAGGAACACAAACTGTGATAATCCTGAGCTTAAGCAGAAGCTCACTAGACTTTGCAAAACAACCACAGTGAAAACAAGGTACGTGGTTATGTCAGAGGAAATACTGATAAAGTATCCAGAACTTGTGACTGAAGGCGTCCCCACAGTGAAGCAGCGGCTAGAGATATGTAACGAGGCAGTGACGGAAATGGCCATTGAGGCTTCACAAGCTTGCATTAAGAACTGGGGTGGATCATTATCAGACATAACTCACTTGGTTTATGTGTCATCCAGTGAAGCAAGACTACCTGGTGGTGACCTTTACCTAGCGAAAGGACTAGGACTGAGCCCTGATACTCAACGAATCATGCTCTATTTCGCTGGTTGTTCAGGAGGTGTGGCTGGCCTACGTGTTGCAAAAGACGTTGCTGAGAACAACCCTGGAAGTCGGGTGTTGCTTGCTACCTCAGAAACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCCTATGATCTTGTTGGGGTGGCACTCTTCGGGGATGGTGCTGGTGCCATGATAATTGGCTCAGACCCAATATTGGAGTATGAGAAGCCTCTCTTTGAGCTTCATACTGCAGTTCAGGAGTTTTTGCCACACACTGAGAAGAAAATTGACGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAAGGGAACTTCCTCAGATAATTGAAGACAGTGTTGAAGCATTCTGTGACAAATTAATGAGCGTTGTTGGGTTTCAGAATAAGGAGTACAACAAGCTGTTTTGGGCAGTCCATCCAGGGGGACCTGCCATCTTGAATCGCGTTGAGAAGAGACTTGATTTGTTACCAGAGAAGCTAAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAACGCTAGCAGTAATACCATTGTGTATGTCCTGGAGTATATGATAGAGGAGGGTCTCAAGATTAGAAAAGATGACAGAGGATATTCTGAATGGGGCTTGATACTTGCATTTGGACCAGGAATTACATTTGAGGGAATTCTTGCCAGGAACTTGTGTACTTGA 1179 0.4538 MGEQGIWKGATKQGVNPGKATILALGKAFPHQLVMQDYLVDGYFRNTNCDNPELKQKLTRLCKTTTVKTRYVVMSEEILIKYPELVTEGVPTVKQRLEICNEAVTEMAIEASQACIKNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDVAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILEYEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDSVEAFCDKLMSVVGFQNKEYNKLFWAVHPGGPAILNRVEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEGLKIRKDDRGYSEWGLILAFGPGITFEGILARNLCT* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00931 392 CDD CHS_like 20 386 - -
Lapu11g00931 392 Gene3D - 6 237 IPR016039 GO:0016746
Lapu11g00931 392 Pfam Chalcone and stilbene synthases, N-terminal domain 12 230 IPR001099 -
Lapu11g00931 392 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 14 390 IPR011141 GO:0009058|GO:0016747
Lapu11g00931 392 FunFam Chalcone synthase 2 5 237 - -
Lapu11g00931 392 Gene3D - 238 389 IPR016039 GO:0016746
Lapu11g00931 392 SUPERFAMILY Thiolase-like 237 388 IPR016039 GO:0016746
Lapu11g00931 392 PIRSF PKS_III 8 391 IPR011141 GO:0009058|GO:0016747
Lapu11g00931 392 SUPERFAMILY Thiolase-like 16 233 IPR016039 GO:0016746
Lapu11g00931 392 FunFam Chalcone synthase 1 238 391 - -
Lapu11g00931 392 Pfam Chalcone and stilbene synthases, C-terminal domain 240 390 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00931 Lapu-Chr11 11812424 11814067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00931 86 380 Miscellaneous Gene Families AT4G34250 25.460 7.72e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00931 - - vun:114168705 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00931 11 11812424 11814067 Lapu11g00931 11 11812424 11814067 ECH