Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00919 ATGGTCCAACCGGCGATGACGCAGTTCCTCAACTCCGTCCTCTCCCAGCGCGGTCCCTCCGCCGTCCCTTACTCCGAGGACACCAAGTGGCTCATCCGCCAGCACCTGGTGGCGCTCACCACCGCCTTCCCTTCGCTCGAGCCCAAAACGGCCTCCTTCACGCACAACGACGGTCGTTCCGTCAACCTCCTCCAGGCCGACGGCACCATCCCCATGACCTTCCAAGGCGTCACCTACAACATCCCAGTCGTCATCTGGCTCATGGAGTCCTACCCCCGCCACCCGCCCTGCGTCTACGTGAATCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTCACGTTAACCCTTCTGGTTTGGTTTCCGTCCCTTACTTGCAGAATTGGACGTACCCTAGTTCCAACCTTGTCGATCTCATTCTCAATCTCAGCCTCCACTTCGGTCGCGACCCTCCCCTCTATTCCCAACGCAGACCTAACCCTAATCCCAGCCCCAATTCCAATCCAAATCCTCACCCTCACCCTCACCCCCATCCTAGTTTCGGAAACTCTTCCTCTAATTTATCTTCTTCTTCTTCTTCGTCTGGCTACCCCCAACCCCACCCCCACCCCCCTTCTAGGACCTACCCTCCTTCCCCATACCCTGCTCCCGCATCGAGGGTTCAGTCCACTGAGGATCCTTCTGAGGTTTTCAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTTCATGGTGATGTTTCCGCGTTGAGGAAGACCAGGGAGGGTGAGATGGAGGGGCTGTTTAGTTTGCAGGGCGTGTTAAAGCAGCGTGAGGAGAGTCTCAACAAGGGGTTGAAGGAGATGCAGGAGGAGATGGAGGCGCTGGAGCAGCAGTTGCAGATTGTGTTGATGAACACTGATGTTTTGGAGGGGTGGTTGAGGGATAACCAGGGGAAGAAGATGGGGAGTTTGGAGAATCCTGAGGATGCTTTTGAGTGTGTGGATGTGCTCTCCAAGCAGATGCTTGACTGCACTGCTGCTGATTTGGCTATTGAGGACACGCTTTATGCGTTGGATAAGGCTCTTCAGGTGGGGTCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGGCGCTGTCCAGGGAGCAGTTCTTTCACCGTGCCACCACAGCGAAAGTTAGAGCGGCTCAGTTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAATCAGCATTATGGTAGCTGA 1227 0.5591 MVQPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTTAFPSLEPKTASFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLILNLSLHFGRDPPLYSQRRPNPNPSPNSNPNPHPHPHPHPSFGNSSSNLSSSSSSSGYPQPHPHPPSRTYPPSPYPAPASRVQSTEDPSEVFKRNAINKLVEMVHGDVSALRKTREGEMEGLFSLQGVLKQREESLNKGLKEMQEEMEALEQQLQIVLMNTDVLEGWLRDNQGKKMGSLENPEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKALQVGSVPFDQYLRSVRALSREQFFHRATTAKVRAAQLQAQVANMAARNQHYGS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00919 408 MobiDBLite consensus disorder prediction 198 217 - -
Lapu11g00919 408 SUPERFAMILY UBC-like 15 153 IPR016135 -
Lapu11g00919 408 Pfam Vps23 core domain 324 386 IPR017916 -
Lapu11g00919 408 Pfam UEV domain 33 153 IPR008883 GO:0015031|GO:0036211
Lapu11g00919 408 SUPERFAMILY Endosomal sorting complex assembly domain 329 389 IPR037202 -
Lapu11g00919 408 ProSiteProfiles Steadiness box (SB) domain profile. 329 397 IPR017916 -
Lapu11g00919 408 Gene3D - 330 390 - -
Lapu11g00919 408 Gene3D Ubiquitin Conjugating Enzyme 1 154 IPR016135 -
Lapu11g00919 408 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 1 396 - -
Lapu11g00919 408 ProSiteProfiles UEV domain profile. 13 157 IPR008883 GO:0015031|GO:0036211
Lapu11g00919 408 MobiDBLite consensus disorder prediction 179 197 - -
Lapu11g00919 408 MobiDBLite consensus disorder prediction 156 178 - -
Lapu11g00919 408 MobiDBLite consensus disorder prediction 152 228 - -
Lapu11g00919 408 Coils Coil 272 299 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00919 K12183 - gmx:100778834 655.595