Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00914 ATGGAGTTGTATTCACTTATTTCCAATATTCTTCTTCTTCTGCTTCTTCTCTCTTTCACCAAAGAAGCTTTGGCTGTGCCAAAGCTTTCGGTAACTGATCATGATAACTATCTTAGTCGGAAAGCACTTGCAGAACAAGAAGCTGATAGAGTTTATGGATTACCAGGACAACCACCAGTGAAATTCAAACAATATGCTGGTTATGTCACAGTCAATGAAACTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAAGCCACTCACAAACCAGAAGAAAAACCAGTTCTCTTGTGGCTCAATGGAGGTCCAGGTTGTTCTTCAATTGGTTATGGAGAAGCAGAGGAGTTAGGACCCTTCTTTCCCCAGAACAGTAGCCAGCCAAAGCTAAAGTTGAATCCTTATTCTTGGAACAATGCTGTCAATCTTCTGTTTTTGGAAAGCCCTGTTGGAGTGGGATTTTCCTACACCAACACCAGCAGTGATATAAACGAGCTTGGAGACACCATTACTGCTAAAGATTCACACATCTTTATCATCAAGTGGTTTAGGAGGTTCCCACAATTCAGATCACACAAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCTGAGCTTATCTTTGACAATAATCTCAACCATGCTGAGAAAGACTACATTAACTTCAAAGGGTTCCTGATTGGAAATGCATTATTGGACGATGAAACTGATCAAAGGGGTATGATAGATTATGCATGGGATCATGCAGTGATATCGGATGGAGTATACCATAACATCACAGCCATATGCGATTTCAATCGTCCAATTCAAAATCAAACGAATGAATGCAACGCGGAACTGAATAAGTACTTCGATGTGTATAAGATTATTGACATGTATAGCTTGTACACTCCCAGGTGTTTCAGCAACCTCAGCAGCACCACCACAAAAGAAGCTTCTCAAACTTTTTCCAAAATTAATGGGTGGCATAGAAAACGAGCTGGATATGATCCCTGTGCATCCGATTACACTGAAGCTTACCTGAACAGACCAGAAGTTCAAAAGGCACTGCATGCCAATGTCACAAAAATTCCCTATCCATGGACTCACTGCAGTGATAACATCACATTCTGGAATGACTCACCTCAGTCCATGCTTCCCGTCCTCAAGAAGCTTATTGCTGGTGGCATTCGCATCTGGATTTACAGTGGAGATACTGATGGAAGAATTCCAGTGACAGCAACAAGATACACACTAAGAAAGTTGGGGCTTGGGATTGTGGAGGATTGGAGTCCATGGTATACTAGCCGTCAGGTGGGAGGATGGAGCATTGTGTATGATGGAGTTACTTTTGTTACCATAAGAGGTGCTGGTCATCAAGTCCCCACTTTCACTCCCAAGCAAGCTCTGCAGTTACTTAGACACTTCATAGAAAATAAGAACTTACCATCTCAGCCAATTTAA 1458 0.4184 MELYSLISNILLLLLLLSFTKEALAVPKLSVTDHDNYLSRKALAEQEADRVYGLPGQPPVKFKQYAGYVTVNETHGRALFYWFFEATHKPEEKPVLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPKLKLNPYSWNNAVNLLFLESPVGVGFSYTNTSSDINELGDTITAKDSHIFIIKWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNLNHAEKDYINFKGFLIGNALLDDETDQRGMIDYAWDHAVISDGVYHNITAICDFNRPIQNQTNECNAELNKYFDVYKIIDMYSLYTPRCFSNLSSTTTKEASQTFSKINGWHRKRAGYDPCASDYTEAYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDSPQSMLPVLKKLIAGGIRIWIYSGDTDGRIPVTATRYTLRKLGLGIVEDWSPWYTSRQVGGWSIVYDGVTFVTIRGAGHQVPTFTPKQALQLLRHFIENKNLPSQPI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00914 485 Gene3D - 383 476 - -
Lapu11g00914 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 Gene3D - 337 374 - -
Lapu11g00914 485 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Lapu11g00914 485 FunFam Carboxypeptidase 45 307 - -
Lapu11g00914 485 Pfam Serine carboxypeptidase 55 477 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Lapu11g00914 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 464 IPR001563 GO:0004185|GO:0006508
Lapu11g00914 485 SUPERFAMILY alpha/beta-Hydrolases 46 481 IPR029058 -
Lapu11g00914 485 Gene3D alpha/beta hydrolase 45 307 IPR029058 -
Lapu11g00914 485 FunFam Carboxypeptidase 383 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00914 Lapu-Chr11 11700863 11707212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00914 345 480 Calmodulin-binding Proteins AT2G22960 30.657 5.49e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00914 K16297 - gmx:100797264 874.774