Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00913 ATGGAGGGAAAAGGAACAACAACGGCCACAGGTTGTTACAAGTGCGGCAGACCAGGTCACTGGTCACGAGACTGCCCTGTCTCTGCTCCCAATCCCACTCCCAATCCAAACCCTAACGCCTCCACCGATCCCACTCCCAATCCTTCTTCCTCTTCTTTCAAGCCCAGATCCGCCACCGAAAAGCCCAAGAAACTCCCCCGGACAAAGCCCAAACTAACACCGGAGATTCTTCTCTCCGACGACGGCCTCGGTTACGTCCTGCGCTATTTCCCTCGCCAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGTGATTTGGGTAACCTGCTTCAGTTGTACACCGAATGGCATTCTCGCTTGCTTCCTTATTACTCTTTCGATCAGTTTATTCATAAAGTTGAGAAAGTTGCCGCTACCAGGCGTGTCAAGACTTGCCTTGTAGAATTGAGAGAAAGAGTTGCAAGTGGTGGAGATCCAACAAAACTGCGTGAACCACCTGTTGTGCATGACGTTCCAATTGATGAACACGGATTTACTGGATCTGCTGAAGATGGTGGCTCAACTCATCAAGAGACAGATATGTTTGCAGATTCTGAAAATGTTACTGACATTCAGGAAGACGTGCTTAATGATATATATGATAAAGCTACCGAAGAACCTCCTCCGTCGATGGACAATGTGATTGACACTAGCATGGCTTCAAAGAGTAACGCAACCGAAAAGATCGCAGAGGAAGCCCAAAATGATGGATCAAGCCAGTCTGGCAGAGCTGAGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTACAAAGGCGTGCTGCTCGAACTGCCTCATCGCACGCCTCCTAA 867 0.4913 MEGKGTTTATGCYKCGRPGHWSRDCPVSAPNPTPNPNPNASTDPTPNPSSSSFKPRSATEKPKKLPRTKPKLTPEILLSDDGLGYVLRYFPRQFKYRGRGHEVRDLGNLLQLYTEWHSRLLPYYSFDQFIHKVEKVAATRRVKTCLVELRERVASGGDPTKLREPPVVHDVPIDEHGFTGSAEDGGSTHQETDMFADSENVTDIQEDVLNDIYDKATEEPPPSMDNVIDTSMASKSNATEKIAEEAQNDGSSQSGRAEITEEQRARMEANRLKALQRRAARTASSHAS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00913 288 ProSiteProfiles Zinc finger CCHC-type profile. 12 26 IPR001878 GO:0003676|GO:0008270
Lapu11g00913 288 Gene3D - 6 50 - -
Lapu11g00913 288 MobiDBLite consensus disorder prediction 29 43 - -
Lapu11g00913 288 SUPERFAMILY Retrovirus zinc finger-like domains 7 28 IPR036875 GO:0003676|GO:0008270
Lapu11g00913 288 MobiDBLite consensus disorder prediction 157 171 - -
Lapu11g00913 288 MobiDBLite consensus disorder prediction 1 73 - -
Lapu11g00913 288 MobiDBLite consensus disorder prediction 215 267 - -
Lapu11g00913 288 PANTHER TIMELESS INTERACTING-RELATED 6 283 IPR040038 GO:0000076
Lapu11g00913 288 MobiDBLite consensus disorder prediction 157 191 - -
Lapu11g00913 288 Pfam Zinc knuckle 11 26 IPR001878 GO:0003676|GO:0008270
Lapu11g00913 288 Coils Coil 257 277 - -
Lapu11g00913 288 MobiDBLite consensus disorder prediction 227 258 - -
Lapu11g00913 288 Pfam Replication Fork Protection Component Swi3 71 152 IPR012923 GO:0005634|GO:0006974|GO:0031297
Lapu11g00913 288 SMART c2hcfinal6 11 27 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00913 K10998 - gmx:100808422 444.121