Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00905 ATGGCTCCCGGGCGTCGACGCGGAGCGAATAAGGCGAAGGCCAATGGCCACTTGAGTTTGGGCGATCTTGTGCTTGCGAAGGTCAAGGGCTTCCCCGCATGGCCTGCTAAGATAAGCAGGCCTGAGGACTGGGAGAAAATCCCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATTGCTTTTGTTGCCCCAGCAGATATTCAGGTATTTACCAGTGAGGCTAAAAATAAGCTGTCAGCTCGTCTTCAAGGCAAGACTAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATACAGAAACAGAAGGCTAGTGGTTTGACCGATGACACTGACGATTCACGTATTGGTTCAGAGGCCCCTTCTAATGATGGGGTAGTAGTTAACCTTAAGGATGCAATTGACACTGTGTTATCAAATCCAGAAAAAGATAACATCGATATGGATGATGTTGGTTCTAATCTAGAGCACTGTACACAGAGAGCAGGGGAAAATGACAGCCTAGACGAAAAACACTCTGTATCTGACCATCCAAATGAAAGTTATTCTGTTTCATCACCAGTGATCAAAAGTAAATTATCCATGAGTTCAGAGCCAAAGAAGAATGCTGGCAAATCAAGTCTAAAAGGTGCTAGTAATGTTAATGATTTTGGGCAAGATGATAAGAGACATAGTGGTTTAACAAATGGGATCAAGCCAAGAAAGCTTGTCAATGGCTTGCGAAAGAGAAGTGAAGTTGCAGGTGATAGAGATAGAAATGGTGGATCATCTACTGGAATTTTTAAGGAGGGAAATTTTACTGGCCGTGGTGATCTTTCTAGGTCTGGAGAGACAATGAAAGCTGGGAAAAAAAGGAAAAATGCATTTGATGTTAAATTGGAATCTCCAGATACTCTAAAATCAGACAATAATGATAATACTGGGGAAAAAGATAGCATGTTGATAAAAGTCAAAACAAGTCTCGAGGTAAAAAATGAGTTGCATGAGATTTCGTTTGATTCCAAGGATGCTGATGGTAAAAGTTCTAGTTTGCGGAAGAAGATGCAACTTCATGCAACCTATAATTTAGGGGCAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGCATGGATACAAAAGATGATTCAACTTTGGGATATCCTTCAAAAGTTTTGAAAAGAACTTCGCCTGGTTCTGCAGTTATTGAAGACAAACCATTTAAAAAGTCAGAATTGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAGGCTTGTCATCAAGGGGTCAAAATAGTGGTGTGGGTTCTGATGATTCTGTCCATGAACTGCTATCAGTGACTAGACATCATATCCAGGTTCAACAAGTTATGCCTGATTCTTCAGTCATTGCATCTGAGGAAAAGAAAGAAAAGAATTATCTCAGACTGAAAGGTGATACAAGTAATGTCATGATAAAACAGGTAGAGAGGAAACGTAGAGCTGTTTGTCTTTTTGATGACGATGATGACGAACCTAAAACTCCTGTTCACGGAGGAGCTGGAAAAAATGTTAAATCATCTTCTGTTTCAGAGGTTAAGAAGAGCAACAATGCACATGCAGAGAAGTCTGATGTTGTTCCGCCGGCTCTAAGAATTTCTAGTGAGCTGGAGGATACCCATTTGAAAGAGCCGTCATCTCAATTACAGAACAACAGTTTGTCAATCAAGCAGCCTCTAAAGGAGAAAGATAGAGAGAAAGATGACGAAGTGATTCCTGTGCATATTCCTCATAGTCCTGAAAAATTAGATTTAAAGCAGCCCGCCTCCAATGCAGCAAAAGTTAGCTCTGTCTCTCCACTAAAATCACCGCAATTGGTGCCTGCAACTAAGTCAAATGCTGAGCGGAATAAAGCTTCCAAGCTGTCAGTTAAAGTTTCCAGTAATGCTACTCAAAAGAAGGCTGATCATGGGACTTCAAAGTGTTCACATAACCTTAGCTCTTCTCAGAATCAAGTTGTGACACATAAAAAGAAGCTTGCATCGTCGGCCGAAATTTCTAAAACTTCACCGGAGACATTGCCTCTGGCAGTTGAAGTTCCTGTTTCAACAATTGGTTTTAAGGATACTGATGCTCTACATGTTGATAGATTGGAGGTAAGCACAGAAGAGAAAAGTACTATGAAGCATCTTATTGCTGCTGCCCTGGCGAAAAGGAAGCAGGCTCATTCGCAATTTCTTCCTTCTGGATTTCCCAATGTTCAGGGGGGAACTCCTAGCCCGTCCACAATTCAGCCATTCCTGTCTGTCTCGAGCAATTTTCTGCATGCCGATATGCAAGGAGTTTATGAGCACACACCATTGACTTCTTCACCAGCTAAAGAGCATAATTCTGCTTCTCATAATCAACTTGATGCTGATGAAATTGAGGATAGAAGGGTTGATTCAGGGCAAAGGGGTCTAGGAGGCTCACTGAGTGGTGGTACTGAGGCTGCTGTTGCTCGGGATGCTTTTGAAGGAATGATTGAAACATTGTCAAGGACCAAGGAAAGTATTGGTCGTGCAACCCGGCTTGCCATTGACTGTGCCAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTTATTCGAAAGCTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGCTCACATAATCAAAAAGGCATTGCAGGAGCATCCTACATTCCTACAGTTCAGGCAGCATTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCTCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGAAAAATTTTCCCTGAATCAGTTCTTCGCCGTTACATGGATGATATTGGAATTTCAAATGATGATATTACAGTTAGCTTTTCTCTCAGACGTCCATCTCGAGCAGAGCGATCTGTGGATGACCCTGTTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGCCTGGATTTTTATCTTCACATGCATTTGAAGAAGATGAAGATGAATATGAAGATGATATACCAATGAAATTGTGTAAGGAGACATGTGATGCGTCTCCAGCAGATCCCCCACATACCCTAGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTGAAGGATGTGGATCGTGAGCTGGAAATGGAAGATGTTTCAGGTCATCCAAAGGATGAAAGGCCTGCATTTTTTAACAGTTCTGATGAAATTGATTTGCAACTTCAGGTGTCAGATAGAAATTTGGATCCAACTCCAAACATTTCAGAAGAGATGTCAGCTACTCCTGAGGGTTCTCCTCCTTTGCCACTTGATTCACCTCCTCCACCCCCACCTTTGCCATCATCACCACCACCCCCTCCTCCTCCATTATCACCTTCACCTCCCCCACCCCCACCACCCCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCATCAGCCCCTCCAGTGTCCTTGGTTCCTCAATCGTCGGGACAAGCTCGGTCACTTCTGTCCCAGCCATTAATGCCATCTCAATCGTCACATCAGTCATCCCCACAGTTGGGGTATCAGCAGAGTGTACCTCATGACTTCAGTGGCACTAATAATGGTAACCAAATAGTTCCAATGGCTGGGAATTCTTTTCCTGGAGGTCACAATAATGCAGCTGTCAAGAATGAAGTATTTCCACAGCCACCTGCTTACGCTCCAACAGCAGGTTGCAGCTCCCAGGAACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAGTACGGACAAAATGATATGTATCTAAATGCTCAAGTTCCTCAACCTAACCATCAATTTCAGCAGGGTAATCCCCCATTTGCACAGAGGCACACACATCCTGCCCCACCCCAAAATCCACCGAATCCGTATCCATATTCAAATCCTACAGTTCAGCAACATCTTCCACATTCATTCCATCCTCCCTTCCCTTTACCATCTCTTCCTGATGGCAGGAGACAATTTGTTGCTGATGAGCAATGGAGATTGTCATCTAGTGAATATAAAACAAATAGTCAACATAGTGTATGGAGAGGAAGAAATCCTTCATGTCCTGGTCCACCCTATGGGCAAGAAGGTCATTTTCAGCCATCATTTGAAAGGACACCAGTAACCACTGTGGGTTTTCAGCGACCAATTTCAAGCAACCTACCTGTTGCTCCAATCTCAGGACACGGTGTACCTCAGATGATGCCCTGTAGGCCGGATATTCCTTCTGTTAATTGTTGGAGACCCACTTGA 4320 0.4308 MAPGRRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKIPDPKKYFVQFFGTKEIAFVAPADIQVFTSEAKNKLSARLQGKTKYFAQAVKEICAAFDEIQKQKASGLTDDTDDSRIGSEAPSNDGVVVNLKDAIDTVLSNPEKDNIDMDDVGSNLEHCTQRAGENDSLDEKHSVSDHPNESYSVSSPVIKSKLSMSSEPKKNAGKSSLKGASNVNDFGQDDKRHSGLTNGIKPRKLVNGLRKRSEVAGDRDRNGGSSTGIFKEGNFTGRGDLSRSGETMKAGKKRKNAFDVKLESPDTLKSDNNDNTGEKDSMLIKVKTSLEVKNELHEISFDSKDADGKSSSLRKKMQLHATYNLGANESLHATKKLKRMDTKDDSTLGYPSKVLKRTSPGSAVIEDKPFKKSELKKSTPNLKTEKGLSSRGQNSGVGSDDSVHELLSVTRHHIQVQQVMPDSSVIASEEKKEKNYLRLKGDTSNVMIKQVERKRRAVCLFDDDDDEPKTPVHGGAGKNVKSSSVSEVKKSNNAHAEKSDVVPPALRISSELEDTHLKEPSSQLQNNSLSIKQPLKEKDREKDDEVIPVHIPHSPEKLDLKQPASNAAKVSSVSPLKSPQLVPATKSNAERNKASKLSVKVSSNATQKKADHGTSKCSHNLSSSQNQVVTHKKKLASSAEISKTSPETLPLAVEVPVSTIGFKDTDALHVDRLEVSTEEKSTMKHLIAAALAKRKQAHSQFLPSGFPNVQGGTPSPSTIQPFLSVSSNFLHADMQGVYEHTPLTSSPAKEHNSASHNQLDADEIEDRRVDSGQRGLGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPESVLRRYMDDIGISNDDITVSFSLRRPSRAERSVDDPVREMEGMLVDEYGSNATFQLPGFLSSHAFEEDEDEYEDDIPMKLCKETCDASPADPPHTLGESETSTVTPNDKRHCILKDVDRELEMEDVSGHPKDERPAFFNSSDEIDLQLQVSDRNLDPTPNISEEMSATPEGSPPLPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPPPPLPPSAPPVSLVPQSSGQARSLLSQPLMPSQSSHQSSPQLGYQQSVPHDFSGTNNGNQIVPMAGNSFPGGHNNAAVKNEVFPQPPAYAPTAGCSSQEPSGFNPSRQLEYGQNDMYLNAQVPQPNHQFQQGNPPFAQRHTHPAPPQNPPNPYPYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRLSSSEYKTNSQHSVWRGRNPSCPGPPYGQEGHFQPSFERTPVTTVGFQRPISSNLPVAPISGHGVPQMMPCRPDIPSVNCWRPT* 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 186 222 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1034 1062 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 171 319 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1289 1319 - -
Lapu11g00905 1439 SMART 558neu5 831 962 IPR006569 -
Lapu11g00905 1439 Pfam CID domain 831 955 IPR006569 -
Lapu11g00905 1439 Pfam PWWP domain 21 104 IPR000313 -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 111 132 - -
Lapu11g00905 1439 FunFam Enhancer of ag-4 2 824 967 - -
Lapu11g00905 1439 SMART PWWP_4 18 75 IPR000313 -
Lapu11g00905 1439 Gene3D - 823 966 IPR008942 -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1177 1228 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 604 661 - -
Lapu11g00905 1439 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 171 185 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 406 420 - -
Lapu11g00905 1439 CDD PWWP_HULK 21 110 - -
Lapu11g00905 1439 SUPERFAMILY Tudor/PWWP/MBT 15 111 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 373 440 - -
Lapu11g00905 1439 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 452 1075 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 284 319 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1104 1118 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 572 596 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1303 1319 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 501 661 - -
Lapu11g00905 1439 Gene3D - 10 114 - -
Lapu11g00905 1439 PRINTS Proline rich extensin signature 1122 1134 - -
Lapu11g00905 1439 PRINTS Proline rich extensin signature 1159 1175 - -
Lapu11g00905 1439 PRINTS Proline rich extensin signature 1134 1155 - -
Lapu11g00905 1439 PRINTS Proline rich extensin signature 1239 1264 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1104 1243 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 780 802 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 421 440 - -
Lapu11g00905 1439 ProSiteProfiles CID domain profile. 824 965 IPR006569 -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 111 125 - -
Lapu11g00905 1439 MobiDBLite consensus disorder prediction 1124 1176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00905 Lapu-Chr11 11631713 11644157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00905 - - gmx:100800279 1796.17