Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00902 ATGGCCACTCTGCAATTTACCTTCACCGATTCAACCTCCTTGTTCAGGCCTTCTCTACCTTCTTCGCGAACCTTCCCTCGGAATCGAAGCTTCATTGTCAAAGCCTCTTCTTCTTCCGACGACATTTCCCGGACCCGGAGACGCTTCCTCGCCGAAACCACCGCTATCTCTGTTTCGCTTCCTCACTTTGCGGCCAAGGCCGAAGACGCGCTTTCGGAGTGGGAGAGAGTGTACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATTGCTTTTGTCCCCGACGATCCCAACCACGGTTTTCTTCTCGGGACGAGGCAAACAATTCTGGAGACGAAGGATGGAGGAAACACTTGGGCTCCGCGTTCGATTCCCTCTGCCGAAGACGAAGATTTCAACTATCGCTTCAATTCTATCAGTTTCAAGGGGAAGGAAGGGTGGATAGTTGGAAAACCTGCGATTCTGTTGTACACTGCTGATGCTGGAGAAAGCTGGGAGAGGATACCTCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCAACCGGTGAGAAGAGTGCAGAGATGGTGACTGACGAAGGAGCAATATATGTTACTGCTAACAGGGGTTACAACTGGAGAGCTGCTGTTCAGGAAACTGTGTCAGCTACTCTTAACAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGTTATTACACTGGAACTTTCAATACTGTCAATCGCTCTCCTGATGGAAGGTATGTTGCAGTCTCAAGTCGGGGCAACTTCTACTTAACCTGGGAGCCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATACAGAACATGGGATGGAGAGCTGACGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCCGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGACGAGGCTTGGGCAGCAGGAGGAAGTGGAATTCTTTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTGAAGTTCATTGATGACAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1179 0.4928 MATLQFTFTDSTSLFRPSLPSSRTFPRNRSFIVKASSSSDDISRTRRRFLAETTAISVSLPHFAAKAEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADAGESWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00902 392 Gene3D - 125 356 IPR015943 GO:0005515
Lapu11g00902 392 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 11 392 - -
Lapu11g00902 392 PIRSF Photosystem_II_Ycf48-like 36 392 IPR016705 -
Lapu11g00902 392 Pfam Photosynthesis system II assembly factor YCF48 70 390 IPR028203 -
Lapu11g00902 392 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 73 391 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00902 - - gmx:100810566 754.592