Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00883 ATGATTCTGCAAACCGCTTCTTCCATTGCACACTTCTCTTCACTCTCCCCTTCTCTCTGTCCCTGTACCGCCGCATTTCCGTTCTCTAGAAGAACCAGAAAGCGCTTATTCGCCAATTCCGGTTCCCGCAAATTCCGCAGAAAACGCGCCGTTCGCTTCTGCGCTCTTCCCTCCGACGCTTCCAATCCAAACTGGAATTCCGAATTCGCCAATTCCGCCCGGAGAACCGCCACAACATTCGTTCTCAAACGAATTTCCAATCAACTCCACGCTGACACCACCACCACCACCACCACCAACACCACCACCACCACCAACAACAACGATGTTGATGATACCGAGCTGCATGATTCAGCTTCGCCGTCTTCGGTTCCATTAGGTTCAAACTTCACCGGTTTCCGCGAGGATCCTATTGTGGATAAGCTGCGGACCCAGCTAGGGGTGATTCACCCGATTCCGTCCCCTCCGATTAACCGCAACGTGGTCGGCTTGTTCGTCTTCTTCTTCTTCGTCGGCGTCGTGTTCGATAAACTGTGGACTTCACGGAGGCGGAGCAAGAGCAGCGGTGAGGACGGGCTGCGCGGCGTGTGGCCGCAGGTGCCGACGAGCTTCTCGCTGTTCCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTTGAATGGGTGAACATGGTGTTGGGGAAGTTGTGGAAGGTGTATAGAGGTGGAATTGAGAACTGGCTTATAGGGTTGCTTCAGCCTGTGATTGATAACTTGAAGAAGCCTGATTACGTTGAGAGGGTTGAGATTAAGCAGTTCTCGCTAGGAGATGAACCCTTGTCTGTTAGGAATGTTGAGCGCAGGACTTCTCGCAGGGTCAACGATTTGCAGTACCAGATAGGCCTTAGGTACACAGGTGGTGCTCGCATGCTGTTGATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTCGTACCTGTTGGTGTTCGAGATTTTGATGTCGATGGCGAACTTTGGGTAAAATTAAGACTAATACCAACAGAACCATGGGTGGGAGCTGTATCATGGGCTTTCGTTTCACTTCCAAAGATCAAGTTTGAACTATCCCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCTATGTTTTTGACTAAACTTCTCACTGAAGATTTACCCAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTCCAAAAAGGAAAAGCGGTTGGTCCAGTTGCTGATGATGTTAAATCTGGAGAAATGCAAGGAAACAAAGACTCTGTGGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATTTTTTATGGCAAGACAGATCCTTATGTTGTTCTTGGCCTTGGTAATCAAGTTATACGCAGCAAAAAGAACAGCCAAACTACTGTAATTGGACCCCCAGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAGAAAACAAAAGTTATTCATCCAAGTAAAGGACGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGACAAAATTGTTGTTTTACAAGGAGGTTGGGGATTTTTAGGAAGGCGCTCTTGTGGTGAGATATTACTTCGGCTAACATATAAAGCATACGTGGAGGATGAGGAAGATGATATGGGCTCCATTTATACTGATGTTTCTGATGACGAGTTGTCTGATTCAGAAGCAAATGTCACTGACGAGAGGGATGAAAGAAGTTCTGTGTATGAAACAGATAAAGAGTCATTTATGGATGTTTTAGCAGCATTAATTGTTAGCGAAGAATTTCAGGGCATAGTAGCATCTGAAACAGGTTTTGGCAAAGTTTTGGATAATGGCTCAAATGCTGGATCTAAAGTTTCAAAGTCTCCGCTTCCCAGTTCTGAACCAATTCCTTCTGGTTCTGATAATTCTAAAGGCTCTGGAGGGTCAGCTTTACTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAATCTCTTCAATCCTTAA 2067 0.4538 MILQTASSIAHFSSLSPSLCPCTAAFPFSRRTRKRLFANSGSRKFRRKRAVRFCALPSDASNPNWNSEFANSARRTATTFVLKRISNQLHADTTTTTTTNTTTTTNNNDVDDTELHDSASPSSVPLGSNFTGFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRSKSSGEDGLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWLIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDVDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVADDVKSGEMQGNKDSVGELSVTLVDARKLSYIFYGKTDPYVVLGLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDKIVVLQGGWGFLGRRSCGEILLRLTYKAYVEDEEDDMGSIYTDVSDDELSDSEANVTDERDERSSVYETDKESFMDVLAALIVSEEFQGIVASETGFGKVLDNGSNAGSKVSKSPLPSSEPIPSGSDNSKGSGGSALLWLAVITSISLLIALNVGGSNLFNP* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00883 688 MobiDBLite consensus disorder prediction 93 109 - -
Lapu11g00883 688 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 43 688 - -
Lapu11g00883 688 MobiDBLite consensus disorder prediction 630 655 - -
Lapu11g00883 688 ProSiteProfiles C2 domain profile. 414 529 IPR000008 -
Lapu11g00883 688 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 426 554 IPR035892 -
Lapu11g00883 688 MobiDBLite consensus disorder prediction 566 581 - -
Lapu11g00883 688 Gene3D C2 domain 406 555 IPR035892 -
Lapu11g00883 688 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 214 401 IPR031468 GO:0008289
Lapu11g00883 688 MobiDBLite consensus disorder prediction 93 126 - -
Lapu11g00883 688 SMART C2_3c 427 528 IPR000008 -
Lapu11g00883 688 CDD C2 428 522 - -
Lapu11g00883 688 MobiDBLite consensus disorder prediction 566 592 - -
Lapu11g00883 688 Pfam C2 domain 426 524 IPR000008 -
Lapu11g00883 688 CDD SMP_SF 236 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00883 Lapu-Chr11 11440777 11449411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00883 428 567 Lipid Metabolism Gene Families AT4G20080 28.859 2.67e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00883 - - gmx:100817508 1108.2