Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00874 ATGCCGAAGCCTTGTGACTTGCAAATCAACATCGATGGTCGGCAGATATTTCTTTTGAAAGAGAAGGTTATATCAAAATACTGTGGAGGGTTGAGAAAAATCTTGAATCGCCAAAAGAGAAGATGCCATGTGAAGGAGTTGGGGATTAGAATCAATGATTTCCCTGGAGGACCAGAAGGGTTTGAGCTAGTTTCGATGTTCTGTTACAATAATGGAAAAATTCAAATCACTGAAGCTAATGTGTGTCTCCTCTACTGTTGTGCTGTTTATCTTGGAATGACTGAGGAGGTACTCAGCAACAATCTGTTGCAGCAAACAGAAACTTTCCTTGAGGGAATCTTCTACTGGAAATGGAATGACATACTTGTGAGTCTCAAGAGTTGCCAGCCGTTTTATACATATGCAGATGGCTATGGTCTCTTGGAGAAGATAATCTGTGTCTTAGCCAAGTTTGTCCAGAATTCAGATTCAAACCTCCTCATGTCCTCACCTTCGGCATCATCATCATTTTCTTCACCCGAAACCAGTTCTGCAAAGAGATTATCTTTTTCATCCAAGAAAACTACCCCAGAAAAAATCAAGTCAGCTTTATCACGCAAGGCATGGTGGTTTGATGATTTGGCAACTTTACCACCAAATATCATTGAGAAACTTATCCAGGCTATTGGAGCTTACAAATCTGATAACAAAGATTTAATCCTCACAAGATTTCTGTTGCATTATCTGAAAATAGCTACTCAAACCAGAGTGGTTAATTGCGGAAACACAAATGAGTATGCTGCTCTTGCAGAAACTGTAACTTATGGGGTCATATCTGTTGGAAAAGAGACCTTTTCTTGCAGAGGTCTTTTTTGGGTTTTAAGGATTGTATCCAAGTTTGGGTTGAGTAGAGATGTTAGAACTGAATTGGAGAAACTGATTGGTGGGGTGCTTGAGCAAGCTACACTGGATGATCTTCTAGTTTCTGGGCATGACATGGGAGTTTATTATGACATTAATTTGGTGATAAGATTGGTTAGGCTATTTGTTGATATCAATGGTTCTGATGATGGAATGTCTTTACAGAAACTTAAAAGGGTTGGTAAATTAATTGACAAGTATTTGAGAGAGATATCCCCTGACCAGAACCTCAAGATCTCGAAATTTCTTGGAGTAGCAGAATGCTTGCCAGACTCAGCAAGGGATTGTTATGACGGAGTCTATAAAGCCATTGACATCTATCTTGAGTCTCACCCAATTATCACATTTGAGGAAAGATCGAGACTGTGTAGATGTCTCAGTTACACCAAACTCAGCTTTGAAGCAAGTAAAGATCTGGCCAAGAACCCCAGAATACCTCCAAGGGTTGCAATGCAGGCTCTTATTTCTCAACAATCAAAAGTTCCAACAATTGACTACGTAAATGAGAGTCCAAGAGTGAAACCTTCCCAAATAGTTTTGTACAATGAAAAAACCAGAAACAGCTTCTCCCAAGAGAAGAAAGATATGGAACTGAACATAGACAAAATGCAATGGGGAGTAATAGAACTGGCGAAATTACACAAGGAAATGAACGGTCACGTATCAAAGTTGCTCTTCCTTAATCCTGCTCGTGCTTCATCCTCACCAAGATTTTGTTGA 1620 0.3963 MPKPCDLQINIDGRQIFLLKEKVISKYCGGLRKILNRQKRRCHVKELGIRINDFPGGPEGFELVSMFCYNNGKIQITEANVCLLYCCAVYLGMTEEVLSNNLLQQTETFLEGIFYWKWNDILVSLKSCQPFYTYADGYGLLEKIICVLAKFVQNSDSNLLMSSPSASSSFSSPETSSAKRLSFSSKKTTPEKIKSALSRKAWWFDDLATLPPNIIEKLIQAIGAYKSDNKDLILTRFLLHYLKIATQTRVVNCGNTNEYAALAETVTYGVISVGKETFSCRGLFWVLRIVSKFGLSRDVRTELEKLIGGVLEQATLDDLLVSGHDMGVYYDINLVIRLVRLFVDINGSDDGMSLQKLKRVGKLIDKYLREISPDQNLKISKFLGVAECLPDSARDCYDGVYKAIDIYLESHPIITFEERSRLCRCLSYTKLSFEASKDLAKNPRIPPRVAMQALISQQSKVPTIDYVNESPRVKPSQIVLYNEKTRNSFSQEKKDMELNIDKMQWGVIELAKLHKEMNGHVSKLLFLNPARASSSPRFC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00874 539 Pfam NPH3 family 202 436 IPR027356 -
Lapu11g00874 539 ProSiteProfiles NPH3 domain profile. 201 460 IPR027356 -
Lapu11g00874 539 PANTHER OS12G0117600 PROTEIN 4 512 IPR043454 -
Lapu11g00874 539 SUPERFAMILY POZ domain 3 95 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00874 Lapu-Chr11 11374090 11377140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00874 6 463 EF-hand Containing Proteins AT3G44820 27.362 1.05e-51 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00874 - - gmx:100808259 903.664