Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00865 ATGGATTATGAGGCTGATGGTTTTGTTGCCAATGGCGAGGGAGAGAGCAAGAGAGTTGGTGAAGGGGTTTCTGAGGAGAGTATGGCGGGGTCCGACAGTTTGAAGGGTTTAGATGTAGAGGAGGATTTTCAGGAGGCATTGGAGCCACGGGAGCATGTTCATGTTCAAGGATCCGAACTCCATCTGGAGGAGGCCGTAGTTGATAAACAGGATGATACCAACACTGGTAATGCATTGACTTCGGCTTTGGTGGATGAAAAAAGTCCAGATGTCGTTCAGGAGCCTGATTCCACTGAGGAGGCTGTTGGGGCTGATTCTGATTATGGGAAGTTGGGGGAAACTGATGTAATTGCTTATCAGGATCTGGTAAGGGATGGGCCGGGAACTCATGGTGTTCATCTGGATGGTGTTGATTCTGGAGTGTCTGGAGATGGAGATTTTTGTGATGATTCTAATGGTGTGGGGGATGATAATTTGGAGCGTAGTGATGAGGGTGGTGGAAAAGAAGAGTCTGGGTTAAATTCTGATGTAGAGCTTTTAGTTAAGGAGAATGGTGTTGTGGCAGATGAAAACTCTGATTTGACGAGTGAGAAGGCTGAAGTTGATGATTCTGAATTCATGACTCCTAGAGAAAATGGTGGTATAACATTGGATGATGTAAGCACAGACAAGGAGGATGGGGTCGCCACTGAGATTATCAAATCTGAATCCAGTGAGGTGATTCCAGCTGACGGTACTGATGCTGGGGATTTGAAGGAGTGTGACGCAGATCCTGAACTTGGAGATGACAAGGTAGAGGTAAATTTAAATGCCTCAGCTGATTCTGCTGCTGAGATTCAAGATGGTACATGTGAAGAAGTACATGACAATTCAGCTCACATGACTTTAGAACAACAGGATGAAGTAACTAGGGATGAGAAGGATGTTACTCTGGGCACTGATATAAGCCACGAGGACAGAAATGGTGAAGAAATGAGTACCAGTGGCATTCAGAATGGTGAATTAACTGGTTACGGAAATGGTGATGCCGAAGATCAAAGCGCATCCTTTTTGGAAAATCACTCAACTAATGAGACACTGCCTATTCAGGAGGATAGTGCAGCTGAACCAAAGGAAGGAACTAATAAGGATGATCTATCTCAGATTTCAGATGAAAATTATAGAGATGATGACAACTTGGTTGAAGAGCCTGAAAGGATAGAGGAGAAGATTATTCAAGAGATAGAAACCACACAAGAGACTGGAGTGCAAAATGTTCAACCTTCAGCAGATATTTCTTCTTCGTCTGAAAGGTCTGCTGATACTGGGCCTCCACCTGTTCGTTCTTCATCTGAAAATTCTTTTGGTGCTGGGCCCGCTCCTGTTCGTCCAGCTGGCCTTGGTCGTGCAGCTCCATTGCTGGAACCTGCATCTCGGGTGGTGCAGCAGCCTCGTGCTAATGGTACTGTGTCTAACACTCAGTCCCAGCAAATGGAGGACTCCTTGAGTGGGGAGGCTGAGGAGTATGATGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCACAATGTTGTTGTTGCTCAAGTGTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGGGGTCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAGGAGCCACTTGATTTCTCTTGTACCATAATGGTCCTTGGAAAGACCGGAGTTGGTAAAAGTGCTACTATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTAATATGGGAACCAAGAAGGTTCAGGATGTCGTGGGAACAGTGCAGGGTATTAAGGTACGGGTCATTGATACGCCAGGACTTCTACCTTCCTGGTCAGACCAGCGAAGCAATGAGAAGATCCTCCTCTCTGTTAAGAACTTCATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAAAGCAGGGATTTTAGTGACATGCCACTCTTACGCACAATTACAGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCCCCTCCCGAAGGCCCCAATGGCACTGCTTCCAGTTATGACATGTTTGTTACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGCCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCCTGGTAGAGAACCACTCTGCTTGCCGAACAAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCCGAAGCAAATGCTCTTCTTAAGTTACAAGATAGTCCACCTGGGAAGCCTTACATAGCTCGAGCACGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCAAGACCGCAGTTGAAGTTGCCAGAGGAGCAGTTTGGTGATGAAGACAGTCTTGATGATGACCTTGATGAGACATCAGAGTCTGATGATGAGAATGAACGTGATGACTTGCCGCCATTTAAACCTCTAACTAAGGCCCAGTTGGAAAAGCTGTCTAAAGCTCACAAGAAAGCATATTTTGACGAGTTAGAGTATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAAAAAGCGACGGAAATTGATGAAGAAAATGGCAGAAGCAGCAAAAGATCTACCAAGTGATTATAGTGAAAATGTGGAAGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTCTCGATGCCAGATTTGCCCCTGCCTGCTTCATTTGATTCTGATAACCCCACTCACCGATATCGTTATCTTGATTCATCAAACCAGTGGATTGTCAGACCTGTTCTAGAAACTCATGGATGGGATCATGACGTGGGTTATGAAGGTCTGAATGTAGAAAGATTGTTCGTTGTGAAGGACAGGGTACCTTTGTCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATAGCCGGCTCAGTTAAGCATGGGGAAGGGAAAGCAACTTCATTAGGTTTTGATATGCAGACTGTGGGGAAGGATTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAAGGCAACCGCAGGTCTCTCGTTTACTTTACTTGGTGATGCCTTATCAGGTGGGGTTAAGATTGAAGACAAATTGGTTGCTAGTAAGAGATTCAAGGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAACGACATTGCTTATGGTGGCAGTTTGGAGGCTCAGTTGAGAGATAAGGATTACCCTTTAGGTCGTTTCTTATCTACTCTCGGGCTCTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCAGTTGGACGACATACAAACCTGGTTGCACGGGCCAATTTGAACAACCGAGGGGCAGGACAAATAAGTATTCGATTAAACAGTTCAGAACAGCTTCAAGTTGCTTTGGTTGCTCTCATCCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTATGGACAATATTAA 3639 0.4479 MDYEADGFVANGEGESKRVGEGVSEESMAGSDSLKGLDVEEDFQEALEPREHVHVQGSELHLEEAVVDKQDDTNTGNALTSALVDEKSPDVVQEPDSTEEAVGADSDYGKLGETDVIAYQDLVRDGPGTHGVHLDGVDSGVSGDGDFCDDSNGVGDDNLERSDEGGGKEESGLNSDVELLVKENGVVADENSDLTSEKAEVDDSEFMTPRENGGITLDDVSTDKEDGVATEIIKSESSEVIPADGTDAGDLKECDADPELGDDKVEVNLNASADSAAEIQDGTCEEVHDNSAHMTLEQQDEVTRDEKDVTLGTDISHEDRNGEEMSTSGIQNGELTGYGNGDAEDQSASFLENHSTNETLPIQEDSAAEPKEGTNKDDLSQISDENYRDDDNLVEEPERIEEKIIQEIETTQETGVQNVQPSADISSSSERSADTGPPPVRSSSENSFGAGPAPVRPAGLGRAAPLLEPASRVVQQPRANGTVSNTQSQQMEDSLSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFNMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDETSESDDENERDDLPPFKPLTKAQLEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKLMKKMAEAAKDLPSDYSENVEEEGGGAASVPVSMPDLPLPASFDSDNPTHRYRYLDSSNQWIVRPVLETHGWDHDVGYEGLNVERLFVVKDRVPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFKVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQVALVALIPLVKKLVGYPQQLQYGQY* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00865 1212 ProSiteProfiles AIG1-type G domain profile. 577 806 IPR006703 GO:0005525
Lapu11g00865 1212 Pfam Translocase of chloroplast 159/132, membrane anchor domain 938 1201 IPR024283 -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 287 324 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 193 207 - -
Lapu11g00865 1212 CDD Toc34_like 552 797 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 154 171 - -
Lapu11g00865 1212 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 579 1127 IPR045058 -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 126 224 - -
Lapu11g00865 1212 Pfam AIG1 family 580 713 IPR006703 GO:0005525
Lapu11g00865 1212 Coils Coil 900 920 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 475 495 - -
Lapu11g00865 1212 FunFam Translocase of chloroplast 120, chloroplastic 552 799 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 833 868 - -
Lapu11g00865 1212 NCBIfam chloroplast protein import component Toc86/159, G and M domains 456 1212 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Lapu11g00865 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 714 IPR027417 -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 838 858 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 67 110 - -
Lapu11g00865 1212 Gene3D - 549 797 IPR027417 -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 369 408 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 1 36 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 287 502 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 409 449 - -
Lapu11g00865 1212 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00865 Lapu-Chr11 11285040 11289795 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00865 - - gmx:100810931 1888.23