Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00860 ATGGCATCGGATAAGGTGGTGGAAACGGTAATAGCAGGGAACTACGTGGAAATGGAAACCGAAGGAAAGCCGAAGGACGTAAAATCCAGGTTATCTACCTTCTTGTGGCACGGTGGTTCTGCTTATGATGCTTGGTTCAGCTGTGCTTCCAACCAGGTGGCTCAAGTGCTGCTTACGTTACCATACTCATTTTCCCAGCTGGGAATGCTTTCTGGCATACTTTTTCAACTCTTCTACGGTTTACTCGGAAGCTGGACGGCTTACCTCATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAGAGAGAGAAAGTTAACTTCAGAAACCATGTCATCCAGTGGTTTGAGGTTCTTGACGGCCTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTCATACAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAACCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTCCACAACTACAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTAACGGTCAGATGGAGGGAGTTAAGCATTCGGGTCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAGTTCAAGGCCATATATTTACTGGCAACACTGTATGTGCTGACACTGACGCTTCCATCGGCAGCAGCAGTGTATTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTCCTCCCAAAATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTCATAACATTCGGGTTTGCATGCACCCCATTATACTTCGTGTGGGAGAAAGCAATAGGGATGCATGAGTGCAAGAGCCTGTGCAAGCGTGCTTTGGTGAGATTGCCAGTGGTGATCCCCATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACTGTTTACATCATCCCCGCCCTCGCCCACATCTTCACCTTCAAATCATCCTCTGCTCGACAGAATGCTGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTTGGAACCTTTATAATCAACTCGTTTGTGGTGGTGTGGGTCCTAGTGGTAGGGTTTGGATTTGGTGGGTGGGCCAGCATGGTTAACTTCATACACCAGATTGACACATTTGGACTCTTCACAAAGTGTTACCAATGCCCTCCACCTCTGCCGCCACAACAGCTCAATGCCACCGCGCCCTCGCCGCTTCACCACCCTCATCACGGCCACTGA 1455 0.4804 MASDKVVETVIAGNYVEMETEGKPKDVKSRLSTFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLNGQMEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFIINSFVVVWVLVVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPLPPQQLNATAPSPLHHPHHGH* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00860 484 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Lapu11g00860 484 PANTHER OS05G0424000 PROTEIN-RELATED 43 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00860 Lapu-Chr11 11248718 11253249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00860 4 484 Organic Solute Cotransporters AT2G21050 86.279 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00860 K13946 - gmx:100812002 934.48