Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00855 ATGATGGGTGGCAACGAGGATCCGAACAACAAAGGCGATTCTCCATTCGAATCCTCGGCATCGCAACCCTTTCTATCGAAACCCTCGTACCCGCCTTCGACATCTTCGGCAGTGGAAGAAGAATCGGAGTCAAACCAGCAATACCTTCACATCACTTACAATTCAGGTCCTCGCTCCTTCAAGGACCTTCCTTTCCTCATTCTCTTCCTTCTCTTCATCATCTCCACTTTCGCCTTTGGCATCTTCGCCGTCTTCCACCGAAACACCAACTACTCCTCTCTCTCCTCTTTCTCCTACGAGCCCACCTCCTCCTCCTGCGTCCTAAACCCTTCTTCCTCTTCTTCCTCCTGGCTTTCCCTCGATTCTTCCTCCCACTTGGTGAAGGGTCTTATATGGACCCTCGTCATCACCTTCGTTCTCAGCATCCCCTTGTGCTGGGCTCTGCTTCTCTTACTCAAGCATTACACCAAACAAATTGTCTACGCTGCGATTCCCTTCTTCATCGCCATCCCTATTTTTCTCAACGTCTATTGGTTCGTCGCATGCACCCTCCGCTCGTCTTGCAGCACCGCTTTCCCTCTCGCGTACCGGATTCTCGTCATGGTCTTCGTCTTCTTGGTGATTGGGGTCGTCGTGTGGATCTTGGTCGTGAATTGGCATCGCTTGGAGCTCACTGTCAGCATAATCGGGGTCGCTTCCCATGCACTTTCCAGGAACTTGACCTTGTTCGCGGTGCTGCCTTGTTTGATTGTTGGGCTTCTCGTGTATTACGTGCCAATAGTGGTTTTCATGGTGTTCGCGAGGTTTAATGGGAAGATTGCGGTGAAGAATTTGGGGAGCGGATATGCTTGTGTGTGGAAGGAAGATTCATGGGTTCCCGCTTATTTTGCTTTGGCTATTCTCACTATGTTGTGGTCTGCGGCAGCTATGGTGGAAGCTCAAGTTTATGTCATCAGTGGCACTATTGCTAATTGGTATTTCTCCAAGGATCATCAAACTCCTAAGCGGAGTATTCGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGTACGATATGTTTGTCAGGATTACTTATCTGTGTTGTTCGAATGGTGCGTTCTGCGGTTGATAGTGCAAGACAAGAGGATACTCCCGGGATAGTGAACCTTGTACTACGGTGCTGTGTAAATGCCTTACTGACAGCAGTTGATTTTCTCAACAAGTTCACCATAAACTTTGCTGCAATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACATATGAACTTCTAAGACGAAATCTTCTCTCTGCAGTTTTTGTGGAGACCATCTCATCTCGCATCCTGGCGGGAATTGTTTTTGTCTTTTCTGCAACATACACAATAGTGGCCTGTGCTATCTTAAAAGCTGGTACCACTCTTGGGTCCGATTCATATTTTGTGGCTGCAATGGCATGGGTGCTACTGATAGTAGTGCTGGGTTACCTCGTGCATGTGCTAGATAATGTAATCGACACAATTTACGTCTGCTATGCGATAGACCGGGACAGAGGAGAGGTTTGTAAACAAGACGTGCATGAGGTGTACGTTCACCTACCCATAAGTAGAAGTCTCAGACAGTCTGTTCCCACAAGAACTCTAGGTGTGTAA 1635 0.4777 MMGGNEDPNNKGDSPFESSASQPFLSKPSYPPSTSSAVEEESESNQQYLHITYNSGPRSFKDLPFLILFLLFIISTFAFGIFAVFHRNTNYSSLSSFSYEPTSSSCVLNPSSSSSSWLSLDSSSHLVKGLIWTLVITFVLSIPLCWALLLLLKHYTKQIVYAAIPFFIAIPIFLNVYWFVACTLRSSCSTAFPLAYRILVMVFVFLVIGVVVWILVVNWHRLELTVSIIGVASHALSRNLTLFAVLPCLIVGLLVYYVPIVVFMVFARFNGKIAVKNLGSGYACVWKEDSWVPAYFALAILTMLWSAAAMVEAQVYVISGTIANWYFSKDHQTPKRSIRTSLRNAFGPSSGTICLSGLLICVVRMVRSAVDSARQEDTPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSATYTIVACAILKAGTTLGSDSYFVAAMAWVLLIVVLGYLVHVLDNVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSVPTRTLGV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00855 544 Pfam Plasma-membrane choline transporter 203 511 IPR007603 GO:0022857|GO:0055085
Lapu11g00855 544 MobiDBLite consensus disorder prediction 11 41 - -
Lapu11g00855 544 MobiDBLite consensus disorder prediction 1 41 - -
Lapu11g00855 544 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 28 510 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00855 - - gmx:100801313 889.026