Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00847 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCCCCTTCCTCTGGTCCCACCACCCGTTCCAGCAAGCGTGCGCGTCTCTCTTCTTCTTCATCTGCTTCCGCCGCCGCCACTGCCACCGCATCTCTTTCTTCTGTCAACACTCGCTCACGTGCCTCCAGAACTAAGGAACAACCCTTGCCTCCGAAGAATCCTCCTCCCATGGACTCAGCCAATGAATCATCTGGTTCCCGCCGTGATCGCCGCAGCAAGGACAACTCCGACAAGGGTAAGGAGAAGGAACACGATGTTAGGATTAGGGACAGAGATGCTGACAGAGGACTGGCATTGAACATGGATGGTGGTGGAGAAGACGATGATAATGACAGTGAAGGTGGTGTGGGGATTTTGCATCAAAATTTGACCTCTGCGAGCAGTGCACTTCAGGGGCTGCTTCGGAAGCTGGGTGCTGGGTTGGATGATCTGCTCCCATCTTCTGCCATGGGTTCTGCATCTTCCTCTCACCAGAACGGGAGGCTGAAAAAGATTCTTTTTGGGTTGCGAGCGGAGGGCGAAGAAGGGCGGCAGGTTGAAGCGTTGACACAACTCTGTGAAATGCTTTCAATTGGGACTGAAGAATCGCTTAGTACATTCTCAGTCGATTCGTTTGTTCCTGTGCTTGTGGGTTTGTTGAATCACGAGAGCAATCCCGACATTATGCTTCTTGCTGCAAGAGCATTAACCCATCTCTGCGACGTGCTACCTTCATCTTGTGCTGCGGTTGTTCATTATGGTGCTGTTTCAATCTTCTGTGCGAGGTTGCTCACCATAGAATACATGGACTTGGCTGAGCAGTCCCTTCAAGCTCTGAAGAAGATATCTCAGGAGCATCCCACTGCCTGCCTACGAGCAGGTGCTCTTATGGCCGTGCTTTCTTATTTGGACTTCTTTTCTACGGGAGTTCAGAGGGTTGCATTGTCTACTGCTGCAAATATGTGCAAGAAACTTCCTTCAGATGCATCTGATTTTGTGATGGAAGCTGTTCCTCTTCTGACAAACCTTCTTCATTACCATGATGCCAAGGTTCTAGAGCATGCCTCTGTTTGTTTGACTCGAATAGCTGAAGCCTTTGCGTCGTCTCCTGACAAATTAGATGAATTGTGCAACCATGGACTGGTAACCCAAGCTGCGTCCCTCATCTCTAATAGCAGTTCTGGAGGTGGTCAGGCTTCTCTCAGCACACCAACATATACTGGTTTAATCCGACTTCTTTCAACTTGTGCGAGTGGATCCCCTCTTGGAGCTAAAACTTTACTACTACTCGGAATTAGTGGTATTCTTAAAGATATTCTATCTGGTTCTGGAGTTTCTTCTAATGCCTCTGTTTCTCCTGCATTAAGTAGGCCCCCGGAGCAGATATTTGAGATTGTAAACCTGGCAAATGAGCTTCTTCCCCCATTGCCACAAGGAACAATTTCTCTCCCTATGATCTCCAACATGTTTCTGAAAGGGCCCATTGTAAGGAAGTCTCCTGCTGGTAGCTCTGGGAAACAAGAAGATTCAAATGGAAATGTTCCTGAGATATCAGCCCGTGAGAAACTATTAAATGACCAGCCTGAACTACTTAAGCAATTTGCTATGGATCTTCTCCCAGTTTTAATACAGATATATGGTTCTAGTGTCAATGGTCCTGTTCGGCACAAATGTCTTTCTGTCATTGGAAAATTGATGTATTTCAGCACAGCAGAGATGATCCAGTCTTTGTTAAGTGTCACCAATATATCAAGTTTCTTAGCTGGCGTCCTAGCATGGAAAGATCCACATGTCTTGGTTCCTGCCTTGAAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTCTCCAAGATGTTCATCAGAGAAGGTGTTGTGCATGCAGTGGACCAACTTATTTTACCTGGAAATTCAACCAATATCTCTACTCAGGCATCTTCTGCCGAGAAGGATAATGATTCTATATCTGGAGCATCATCTCGCTCTAGGCGTTATAGACGACGCAGTGGAAGTTCCAATCCTGATGGAAATCCTTTGGACGATTTGAAGGCTCCAGTTTCAGTAAATGTTGGTTCACCTCCAAGTTCTGTAGATATTCCAACAGTAAATTCCAGTATTCGTTTGTCTGTTAGTACAGCTGCAAAAGCTTTTAAAGACAAGTACTTTCCTTCAGATCCTGGGGCTTCTGAAGTGGGTATTACTGATGATCTTTTGAACCTGAAAAATCTGTGCATGAAGTTAAATGCTGGTGCGGACGAACAAAGGACCAATGGAAAGGGGAAATCTAAATCTTCTGGATTTGTTCCAGAAGAGTATTTAATTGGGGTCATAGCTGACATGCTAAAGGAACTTGGCAAAGGTGACGGTGTATCTACTTTTGAATTTATCGGTAGTGGTGTTGTTGCAGCTTTGTTGAATTATTTTTCTTGTGGGTACTTCTCTAAGGATAAATCCTTAGAAACCCACCTTCCAAACCTTCGCCAACAAGCACTTACAAGGTTTAAGTTATTTGTAGCTGTTGCACTACCTTCCTCAACTGAGGTTGGGACTGTGGCTCCTATGACTGTCTTGGTCCAGAAACTTCAAAATGCCTTGTCCTCCTTGGAGCGTTTCCCTGTTGTGCTGAGTCATTCATCTAGGTCATCTAGTGGGAGTGCACGCCTCTCCTCTGGATTAAGTGCATTATCTCATCCCTTCAAGTTGCGGCTTTGTCGAGCCCAGGGTGAAAAATCACTTAAGGATTATTCATCAAATGTTGTATTGGTTGATCCGTTAGCAAGTTTAGCAGCCATCGAGGAATTTCTTTGGTCTCGTATCCAACGAAGTGAATCTGGTCAGAAGTCCACTGTACCTGCTGGGCATTCTGAATCAGGGACAACTCCTGCAGGAGCTGGTGTATCATCTCCTTCCACTACCCGTCGTCATTCTACTAGATCGAGATCATCTGTTAATATAGGTGACACATCCAGAAAGGAAATACTTCAAGAGAAAAGCACTAGCTCTTCTAAGGGTAAGGGAAAAGCTGTATTAAAGCCTGCGCAAGAGGAGGCAAGAGGACCTCAAACCAGGAACGCCACTCGCAGAAGAGCAGCTCTTGATAAAGATGCTCAAACAAAGCCTGTAAACGGTGACTCTACTTCTGAGGATGAAGATTTGGATATATCTCCTGTTGAGATTGATGAGGCGTTGGTGATTGAAGATGATGATATTTCTGATGATGAAGATGATGACCATGAAGATGTTCTGAGGGATGATTCTCTTCCTGTGGTGTGCTCTCCTGACAAAGTACATGATGTGAAATTGGGCGACTTGTCCGAGGAGAGTACTGTTGCTCCTGCAACAAGTGATGGCCAGACTAATGCTGCCTCAGGTTCTAGCAGCAAAGCTGGTACAGTGAGGGGATCAGACTCTGCTGATTTTAGGAGTGGCTATACTTCAAGTTCAAGAGGGGCAATGTCATTTGCTGCTGCTGCCATGGCTGGACTTGGTTCTGCAAATAGCAGAGGTATCAGGGGTGGAAGAGATCGACTAGGGCGTCCATTGTTTGGTAGTTCTAATGATCCTCCAAAGTTGATCTTTACTTCTGGCGGGAAGCAGCTTAATAGGCATTTGACTATATATCAGGCAATTCAAAGACAGCTTGTGCAAGATGAAGACGACGACGAGAGGTTTGCTGGCAGTAATGACTTTGTATCTAGTGATGGAAGCAGGTTGTGGGGTGATATTTATACTATAACTTATCAGAGGTCTGAGAACCAAACAGATAGGGCTACCCCTGGAGGTTCAAGCTCTAATGCTTCAAAATCTGGAAAATCAGGCTCTATATCGAATTCTAGTTCTGAAGCCAAGCTACATCAGACATCTGTATTAGATAGTATCTTGCTGGGTGAATTGCCCTGTGAATTGGAGAAATCTAATCCTACATACAATATATTGGCATTATTGCGAGTGCTAGAGGGTTTGAACCAACTTGCGTCTCGTTTGAGGGCCCAAGTGGTTACTGATAACTTTGCAGAGGGAAAAAGTTTGGATTTAGATGAGCTAAGTGTTATCGCCGGAGCGAGGGTTCCTGCAGAGGAGTTTATAAGCAGCAAACTTACTCCAAAATTAGCTAGGCAAATACAAGATGCCCTTGCCTTATGCAGTGGGAGTCTTCCTTCATGGTGTTACCAGCTAACTAAAGCATGCCCTTTCTTGTTTCCTTTTGAGACCCGGAGACAGTACTTCTATTCAACAGCCTTTGGGTTATCTCGTGCACTGTATCGCCTTCAGCAGCAGCAGGGTGCTGATGGTCATGGATCAACAAATGAAAGAGAGATCAGGGTTGGGAGATTGCAGCGTCAAAAGGTTCGTGTATCTCGAAATCGAATTTTGGATTCTGCTGCCAAAGTGATGGAGTTGTATTCTAGTCAAAAGGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGCACTGGTCTGGGTCCCACCTTGGAATTCTACACACTTCTCAGTCATGACTTACAAAGAGTTGCACTTCGAATGTGGAGATCAGGTTCTTCAGATAAATATCCAATGGAAATTGATGGAAATGAAAGGAAAATGAAAAGTAGTGAAGGCTCTTTTACCGGAGATGGAGAACTCGTTCAAGCTCCTCTTGGGCTGTTTCCTCGACCTTGGCCTGCAAATAGTGATGCATCAGAGGGTACCCAATTTTTTAAAGTTATTGAATATTTCCGGCTATTAGGTCGAGTAATGGCTAAAGCTCTCCAAGATGGACGCCTATTGGATTTACCACTGTCAGTGGCATTTTATAAGCTTGTTCTTGGTCAAGAGCTTGATTTGCATGATGTTCTTTTCATTGATGCCGAGCTTGGGAAAACTTTGCAAGAGTTAAATGCCCTTGTTTGGCGGAAACGGTATCTTGAATCTTTTGGTGGTTGCTATACTGATGCAGTTAGTAATTTACATTATCGTGGGGCTCCAATAGAAGATCTCTGCTTCGACTTCACACTTCCTGGTTATCCAGAGTACATCTTGAAACCTGGAGATGAAATTGTTGACATCAATAATCTAGAGGAATACATATCCATGGTGGTCGAGGCAACTGTTAAGACTGGAATCATGCGTCAGATGGAAGCATTTAGAGCAGGGTTCAATCAGGTTTTTGAAATCTCATCTTTGCAAATCTTTACTCCCCAAGAACTGGATTACTTGCTTTGCGGCCGTAGAGAATTGTGGAAGACTGAGACACTAGCTGATCATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCAGCCATAGTTAATTTACTTGAAATCATGGGAGAATTCACACCAGAACAGCAGCGAGCCTTCTGTCAATTTGTTACTGGTGCACCTAGACTGCCACCTGGTGGACTAGCGGTTCTAAATCCAAAACTAACAATTGTGAGGAAGCTTTCGTCAAGTGCTGCTAATGCTTCATCTAATGGAAACGGGCCTTCAGAATCAGCGGATGATGACTTGCCAAGTGTGATGACGTGTGCAAATTACCTGAAACTTCCTCCTTATTCTAGCAAGGAAATTATGTACAAGAAGCTACTCTATGCAATCAGTGAAGGTCAGGGATCCTTTGATTTATCATGA 5643 0.4464 METRSRKRAEASSAAPSSPSSGPTTRSSKRARLSSSSSASAAATATASLSSVNTRSRASRTKEQPLPPKNPPPMDSANESSGSRRDRRSKDNSDKGKEKEHDVRIRDRDADRGLALNMDGGGEDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSHQNGRLKKILFGLRAEGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDFVMEAVPLLTNLLHYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNASVSPALSRPPEQIFEIVNLANELLPPLPQGTISLPMISNMFLKGPIVRKSPAGSSGKQEDSNGNVPEISAREKLLNDQPELLKQFAMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALKIAEILMEKLPGTFSKMFIREGVVHAVDQLILPGNSTNISTQASSAEKDNDSISGASSRSRRYRRRSGSSNPDGNPLDDLKAPVSVNVGSPPSSVDIPTVNSSIRLSVSTAAKAFKDKYFPSDPGASEVGITDDLLNLKNLCMKLNAGADEQRTNGKGKSKSSGFVPEEYLIGVIADMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDKSLETHLPNLRQQALTRFKLFVAVALPSSTEVGTVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLSALSHPFKLRLCRAQGEKSLKDYSSNVVLVDPLASLAAIEEFLWSRIQRSESGQKSTVPAGHSESGTTPAGAGVSSPSTTRRHSTRSRSSVNIGDTSRKEILQEKSTSSSKGKGKAVLKPAQEEARGPQTRNATRRRAALDKDAQTKPVNGDSTSEDEDLDISPVEIDEALVIEDDDISDDEDDDHEDVLRDDSLPVVCSPDKVHDVKLGDLSEESTVAPATSDGQTNAASGSSSKAGTVRGSDSADFRSGYTSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRLGRPLFGSSNDPPKLIFTSGGKQLNRHLTIYQAIQRQLVQDEDDDERFAGSNDFVSSDGSRLWGDIYTITYQRSENQTDRATPGGSSSNASKSGKSGSISNSSSEAKLHQTSVLDSILLGELPCELEKSNPTYNILALLRVLEGLNQLASRLRAQVVTDNFAEGKSLDLDELSVIAGARVPAEEFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNEREIRVGRLQRQKVRVSRNRILDSAAKVMELYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQRVALRMWRSGSSDKYPMEIDGNERKMKSSEGSFTGDGELVQAPLGLFPRPWPANSDASEGTQFFKVIEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVLGQELDLHDVLFIDAELGKTLQELNALVWRKRYLESFGGCYTDAVSNLHYRGAPIEDLCFDFTLPGYPEYILKPGDEIVDINNLEEYISMVVEATVKTGIMRQMEAFRAGFNQVFEISSLQIFTPQELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSSAANASSNGNGPSESADDDLPSVMTCANYLKLPPYSSKEIMYKKLLYAISEGQGSFDLS* 1881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 1 133 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 652 698 - -
Lapu11g00847 1880 CDD HECTc 1459 1875 IPR000569 GO:0004842
Lapu11g00847 1880 FunFam HECT ubiquitin protein ligase family protein KAK 172 486 - -
Lapu11g00847 1880 Gene3D - 188 659 IPR011989 -
Lapu11g00847 1880 FunFam Putative E3 ubiquitin-protein ligase HECTD1 1749 1879 - -
Lapu11g00847 1880 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 10 1880 IPR045322 GO:0006511|GO:0061630
Lapu11g00847 1880 SMART arm_5 210 251 IPR000225 GO:0005515
Lapu11g00847 1880 SMART arm_5 336 374 IPR000225 GO:0005515
Lapu11g00847 1880 SMART arm_5 293 333 IPR000225 GO:0005515
Lapu11g00847 1880 Gene3D Hect, E3 ligase catalytic domains 1399 1640 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 80 114 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 1058 1092 - -
Lapu11g00847 1880 ProSiteProfiles HECT domain profile. 1580 1880 IPR000569 GO:0004842
Lapu11g00847 1880 Gene3D Hect, E3 ligase catalytic domain 1752 1878 - -
Lapu11g00847 1880 SMART hect_3 1470 1880 IPR000569 GO:0004842
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 953 1155 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 652 670 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 1119 1155 - -
Lapu11g00847 1880 SUPERFAMILY ARM repeat 179 652 IPR016024 -
Lapu11g00847 1880 SUPERFAMILY Hect, E3 ligase catalytic domain 1452 1873 IPR035983 GO:0004842
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 1032 1046 - -
Lapu11g00847 1880 FunFam E3 ubiquitin-protein ligase UPL3 1400 1641 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 10 63 - -
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 953 1000 - -
Lapu11g00847 1880 Pfam HECT-domain (ubiquitin-transferase) 1507 1880 IPR000569 GO:0004842
Lapu11g00847 1880 MobiDBLite consensus disorder prediction 1261 1292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00847 Lapu-Chr11 11125230 11136925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00847 K10590 - gmx:100783336 3180.58