Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00846 ATGTCAACTCTCAAACTTGTTTTGGTTACCTTGCTTTTCATCAGTGTTTCACTGACCTTAGCGTCCGGTGCCAAGGAAGGGAAGAAGAAGAAGAAGGAATCTGATTCTAGCTCAGATGATGGAGTCAAAAAGAAGGAAATCACTTACGATAGCAGGTCACTAGTTATCAATGGAAAACGGGAGCTTCTCTTCTCCGGTTCCATCCATTACACTCGAAGTCCCCCAGAGTCATGGCCAGTAATTATTGACAGAGCAAGACGTGGAGGTATAAACGTGGTGCAAACTTACATCTTCTGGAACATCCACGAGCCTGAGAAAGGCAAGTTTAAAATGGATCCGGAGTATGATTTCGTAAGGTTCATTCAGATCTGTCATGAGAAAGGAATGTATGTAACCATCAGGCTTGGGCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCGTATTGGCTAAGAGAGGTCCCTGATATCATATTCCGCTCTAACAATGAACCCTTTAAGGCGCACATGAAACAATATGCAACAACTGTTGTAAACATATTGAAAGACGCGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACGTGCTTTTAGAGAGGAAGGAAATAATTATGTCCAATGGGCCGCAAATATGGCAGTGTCACTGGATGTTGGAGTTCCATGGATCATGTGCAAGCAAACGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTTACAGGCCCCAACAAACCCCACAAACCTTCCCTGTGGACTGAAAACTGGACTGCTCAGTATAGGGTGTTTGGAGATCCACCGTCCCAAAGATCAGCAGAAGACATTGCCTTCTCAGTTGCCCGTTTCTTCTCTAAGAATGGGTCTTTGGTGAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTCAGTACAACCCGATATTACGATGAAGCCCCTCTTGATGAGTTCGGTTTGCAGAGAGAACCAAAATGGTCTCACCTTAGGGACGCGCACAGGGCATTGAACCTCTGCAGGCAGGCCCTGTTCGGGGCTGAATCATTCGTCACAAAATTGAGCCAGCATCATGAGGTTATAGCTTTCGAGAGGCCCGGTAGTGACTTATGTTGTGCTTTCATCACTAACAACCACACCAAAACAGCAGCCACCGTAAAGTTCAGAGGTTCGAAGTATTATCTGCCACCACGTTCCATTAGTATCCTCCCTGACTGCAAGACTGTGGTCTTCAATACCCAAAATATTGCCTCACAACATAATTCAAGGAACTTCAAGAAGTCACAAAATGCAAACAATTTCAAGTGGGAGGTGTTTACTGAGAAAATTCCAGACACCAAGGATATACCAGTTAGTTTAAATGTTCCCATGGAGCTTTATAACTTGCTTAGAGATACCAGCGACTATGCATGGTACACCACCAGCGTGGAATTGGGTCCGGGAGACTTGCCAAAGAAGAATGAGACCGTTCTTCGTATTATGAGTCTTGGCCATTCACTGCATGCCTTTCTAAATGGAGAATTTATTGGATCAAATCATGGTACTCATGAAGAGAAAGGTTTTGAATTCCAGAAACCTGTAACCTTCAAGGTTGGAGTTAACCGGATAGCTATCTTGGCTAGCACTGTTGGACTCCCTGACAGTGGAGCATACATGGAGCACAGGTATGCTGGACCCAAGTCTATACTCGTCCTTGGTCTTAACTCCGGAAAAATTGATCTGACTTCTAATGGTTGGGGTACTAAGGTTGGTCTCCAAGGTGAGGAGTATGCTATTTTCACTGAGAAGGGATCAAAGAAAGTAGAATGGAAAGAGGTCAAGAGATCTGGAAAGGTTCTCTCCTGGTACAAGACGAATTTTGCAACCCCAGAGGGAAGGGATCCTGTTGCAATAAAGATGACTGGTATGGGGAAGGGAATGATTTGGATTAATGGTAAAAGCATTGGTCGTCATTGGATGAGCTTCCTCTCTCCCCTTGGAAGTCCTACTCAGTCAGAGTACCACATCCCAAGATTTTTCCTGAATCCAAAAGACAACTTGCTTGTTATATTGGAGGAAGAGAAAGCAAACCCAACAAATATTGAGATCCTAACTGTTGACAGAGATACAATATGTAGTATGATCACAGAGAATCACCCTCCCAACGTCAATTCATGGGCATCTAAGGGTGGGAAGTTCCAGGCTGTTGTGGAAAAACCAGGGCCAGTAGCTTCAGTGCAATGTCCAAACTACAAAACCATTAAGGCTGTGGAGTTTGCAAGCTATGGTGATCCTACGGGTGTCTGTGGAGCCCTTGTTATGGGAAAATGCGATGCACCTTCCACCAAGCAGATTGTTGAACAGGCAAACCTCTCATTTCATTCTTTGCTTTCTTTATATCTTATGCTGTGA 2460 0.4451 MSTLKLVLVTLLFISVSLTLASGAKEGKKKKKESDSSSDDGVKKKEITYDSRSLVINGKRELLFSGSIHYTRSPPESWPVIIDRARRGGINVVQTYIFWNIHEPEKGKFKMDPEYDFVRFIQICHEKGMYVTIRLGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKAHMKQYATTVVNILKDAKLFAPQGGPIILAQIENEYNHIQRAFREEGNNYVQWAANMAVSLDVGVPWIMCKQTDAPDPVINACNGRHCGDTFTGPNKPHKPSLWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLQREPKWSHLRDAHRALNLCRQALFGAESFVTKLSQHHEVIAFERPGSDLCCAFITNNHTKTAATVKFRGSKYYLPPRSISILPDCKTVVFNTQNIASQHNSRNFKKSQNANNFKWEVFTEKIPDTKDIPVSLNVPMELYNLLRDTSDYAWYTTSVELGPGDLPKKNETVLRIMSLGHSLHAFLNGEFIGSNHGTHEEKGFEFQKPVTFKVGVNRIAILASTVGLPDSGAYMEHRYAGPKSILVLGLNSGKIDLTSNGWGTKVGLQGEEYAIFTEKGSKKVEWKEVKRSGKVLSWYKTNFATPEGRDPVAIKMTGMGKGMIWINGKSIGRHWMSFLSPLGSPTQSEYHIPRFFLNPKDNLLVILEEEKANPTNIEILTVDRDTICSMITENHPPNVNSWASKGGKFQAVVEKPGPVASVQCPNYKTIKAVEFASYGDPTGVCGALVMGKCDAPSTKQIVEQANLSFHSLLSLYLML* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00846 819 Pfam Glycosyl hydrolases family 35 53 359 IPR031330 -
Lapu11g00846 819 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 192 204 IPR019801 GO:0004553|GO:0005975
Lapu11g00846 819 Gene3D Glycosidases 43 363 - -
Lapu11g00846 819 SUPERFAMILY (Trans)glycosidases 45 363 IPR017853 -
Lapu11g00846 819 Gene3D - 437 581 - -
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 271 286 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 661 677 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 190 205 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 634 648 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 78 96 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 327 343 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 133 152 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 308 323 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 PRINTS Glycosyl hydrolase family 35 signature 57 74 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 Pfam Beta-sandwich domain in beta galactosidase 372 439 IPR041392 -
Lapu11g00846 819 Gene3D - 605 734 - -
Lapu11g00846 819 PANTHER BETA-GALACTOSIDASE RELATED 40 747 IPR001944 GO:0004553|GO:0005975
Lapu11g00846 819 SUPERFAMILY Galactose-binding domain-like 423 581 IPR008979 -
Lapu11g00846 819 CDD Gal_Rha_Lectin_BGal 756 811 - -
Lapu11g00846 819 FunFam Beta-galactosidase 604 728 - -
Lapu11g00846 819 SUPERFAMILY Galactose-binding domain-like 600 748 IPR008979 -
Lapu11g00846 819 FunFam Beta-galactosidase 43 363 - -
Lapu11g00846 819 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00846 Lapu-Chr11 11118770 11123446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00846 46 807 Glycoside Hydrolase AT2G16730 59.061 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00846 - - gmx:102663614 1315.83