Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00839 ATGGCTATCCAAGCGCAGTGGTATCCAAATAATTCTGCTTCTCCATTCTGGAATAATGGTCATTGTGCTGCTGGCTTCATGGAATCTAGCATCGGTTTTCAGCAGAAACATCATCATCCACAACAGCTAGCAGAACAGAATTTGGGAGAGCTGTGCAATGGGAGTCAGGGGACTGTTGATCCTAATCTTCATTTCTGTAGTTCAAAAGAGTTGAATTCTCCAATGTTTGCTATTCAGTTTGAGAAACAATGGGAAGAGATTAATCAGTACATCAAATCCGAGGATGAAAAATTGAGATATATGATCCAAGAGCATGGGAAACAACAGGTGATGACATTGTTGAAAAAACTGGAAACTCGTTCACTTCATGTACTCAGGGAAAAAGATGAAGAAATTGCGCAAGCCATGAAGAAAAGGTTAGAGTTAGAAGAGTATTTAAGAAAGCTAGAGGTGGAAAATAGCAGGTGGCAGAGGTTGGCTCAGGAGAACGAAAACATGGCATTGTCCCTCTACAAAACACTGGAGGAAATGACAGAAGGTGACAATTTTTTGAACAATGGGACAGTGGCAAATGATGCAGTGTCCTGTTGCGGTGAAACTGGAGGAATGGAAGAAACGGAAGAAGAAGCAACGGCTGAAAAAGGTTTAGAATGTGATAGGGTAAGTGAACTTGAACAGATTACGAGAAGAGGAGGAGTAATGCTTTGTAAAAGCTGTCATTCTAGGAGCTCGTGCTTTCTGTTTCTCCCATGCAGGCACCTTTCTTCCTGCAAAGTTTGTAACGCTTCCCTCGAGGCTTGCCCCGTCTGCAGAACACCAAAGAAAGCTACCATTGAGTTGAGACTCTGA 849 0.4252 MAIQAQWYPNNSASPFWNNGHCAAGFMESSIGFQQKHHHPQQLAEQNLGELCNGSQGTVDPNLHFCSSKELNSPMFAIQFEKQWEEINQYIKSEDEKLRYMIQEHGKQQVMTLLKKLETRSLHVLREKDEEIAQAMKKRLELEEYLRKLEVENSRWQRLAQENENMALSLYKTLEEMTEGDNFLNNGTVANDAVSCCGETGGMEETEEEATAEKGLECDRVSELEQITRRGGVMLCKSCHSRSSCFLFLPCRHLSSCKVCNASLEACPVCRTPKKATIELRL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00839 282 FunFam Baculoviral IAP repeat containing 7 245 280 - -
Lapu11g00839 282 Gene3D - 88 115 - -
Lapu11g00839 282 Gene3D - 245 278 - -
Lapu11g00839 282 Coils Coil 125 166 - -
Lapu11g00839 282 ProSiteProfiles Zinc finger RING-type profile. 236 271 IPR001841 -
Lapu11g00839 282 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 69 279 IPR017066 -
Lapu11g00839 282 Pfam Zinc finger, C3HC4 type (RING finger) 235 275 - -
Lapu11g00839 282 Gene3D Death Domain, Fas 116 244 IPR011029 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00839 Lapu-Chr11 11072676 11073676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00839 235 272 Miscellaneous Gene Families AT2G21380 42.105 7.64e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00839 K19042 - gmx:100789863 389.423