Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00818 ATGTCGCCGTCGACGACCGGAAACTGCAGTAAAATCCGGCGCATTGTGCGCGTGCGGCAAATGCTTCTCCGGTGGCGGAGAAAGGCGCGGCTGGCGGCGTCGGACGTTCCGGCCGGACACGTGGCGGTGTGCGTGGGTCCCAGCCGGAGGAGGTTCATCGTGCGCGCCACGTACCTGAACCACCCGATCTTCAAGATGCTTCTCGCGAAAGCAGAAGAAGAATACGGTTTCTGCAACCACGGTCCTCTCGCTATTCCTTGTGACGAGTCTCTGTTCGAAGAGCTTCTCCGGGTCGTGGACCGACCCGTACCCGGATTATACACGCTCGAGGATTTAAGGAGACGGTGCCACGTGGATGTGTCGAGTAGCAACTCTGAATCGTGGCCGTTTCTTCGTGATGAACTGATCTGCTGA 414 0.587 MSPSTTGNCSKIRRIVRVRQMLLRWRRKARLAASDVPAGHVAVCVGPSRRRFIVRATYLNHPIFKMLLAKAEEEYGFCNHGPLAIPCDESLFEELLRVVDRPVPGLYTLEDLRRRCHVDVSSSNSESWPFLRDELIC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00818 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 95 IPR003676 GO:0009733
Lapu11g00818 137 Pfam Auxin responsive protein 24 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00818 Lapu-Chr11 10960912 10961751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00818 7 131 Calmodulin-binding Proteins AT4G34750 54.286 8.17e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00818 K14488 - gmx:100795345 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00818 11 10960912 10961751 Lapu11g00818 11 10960912 10961751 ECH