Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00812 ATGGCTGTGGACGAAGCTGCATCTGTGATGGAAAATCTTGATCGTCAGAAGAAGCCCAAAAGAAACAAGTTTGCTTTGGCTTGTGCCGTTTTAGCTTCCATGACTTCCATCTTACTAGGTTATGATATTGGAGTGATGAGTGGTGCAGCGTTGTACATACAACGAGATCTCAAAGTATCCGACGTCCAAATCGAAATCCTGAACGGTATCATCAACCTCTACTCGCCGGTCGGTTCTTTCATCGCCGGCAGAATATCCGACTGGATAGGTCGGCGTTACACCATTGTCCTCGCCGGTGTCATCTTCTTTGTCGGAGCAATCCTCATGGGATTCTCCCCTAACTACGCATTTCTCATGTTTGGCCGTTTCTTCGCTGGCGTCGGCATCGGCTTCGCCTTCCTCATCGCCCCCGTCTACACCTCCGAAATCTCCCCTACCTCCTCTCGTGGCTTGCTCACTTCCTTGCCAGAGATATTTCTGAACGGAGGGATTCTAATAGGATACATTTCAAACTATGGATTTTCGAAGCTGCCGCTTAGGCTGGGATGGCGGCTCATGCTTGGAGTGGGAGCTGTTCCCGCCATTTTCCTAGCCGTGGCGGTGTTAGCCATGCCGGAATCGCCGAGGTGGCTTGTGGCGCAAGGTCGATTAGGCGAAGCCAGAAGAATTCTGCACAAAATCTCCGACTCGGAGCAAGAGGCACGGCTAAGGCTAGCGGACATAAAAGACACGGCTGGGATCCCTCAGGAGTGCGACGACGACGTCGTTTTAGTGAACAAGCAAAGCCACGGGAAAGGCGTGTTGAAAGAGCTTTTCCTCCACCCCACGCCCGCAGTTCGACACATCTTCATCGCGTCGCTCGGGATTCACTTCTTCGCGCAAGCCACGGGCATCGACGCTGTTGTTCTGTACAGCCCCAGAATCTTCCAGAACGCCGGTATCAAATCCGATAACTACCTTCTCCTCGCCACGGTCGCGGTTGGGTTCGTGAAAACCGTTTCAATTTTGGTTGCGACATTTTTGTTGGACCGGGCCGGGCGGCGCGTGTTGCTTTTGTGCAGCGTTAGTGGGCTGATAGTCTCGCTTATGACGCTGGGTGTGAGTCTCACCGTGGTGGGCCATTCTGGATCGACGCTGAGGTGGGCCATTGCGCTGAGCATCGCTGCGGTGTTGGCCTACGCTGCAACATTCTCGATTGGGTCGGGGCCCATCACGTGGGTGTATAGCTCGGAGATTTTCCCGCTTAGGTTGCGCGCTCAGGGTGTGGCTATTGGGGCCGTGGTGAATAGGGTGACGAGTGGGGTGATCTCAATGACTTTTCTGTCCCTCTGTAAGGCCATCACCACTGGTGGTGCCTTCTTCCTCTTCGCCGGTGTCGCTGTTGCTGCGTGGATTTTTCACTACACAATGCTCCCCGAAACTCGTGGGAAGACTCTTGAGGAAATTGAAGGCTCTTTCGGTCATTTCTGGAGGAACCCTCGGACCAAAGGACTTCGCCAGGGTAACGCCGAAGTCCAATTAAAGACCACTGCCCAAATTTCCACAAACTTGGATTAG 1557 0.5344 MAVDEAASVMENLDRQKKPKRNKFALACAVLASMTSILLGYDIGVMSGAALYIQRDLKVSDVQIEILNGIINLYSPVGSFIAGRISDWIGRRYTIVLAGVIFFVGAILMGFSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEISPTSSRGLLTSLPEIFLNGGILIGYISNYGFSKLPLRLGWRLMLGVGAVPAIFLAVAVLAMPESPRWLVAQGRLGEARRILHKISDSEQEARLRLADIKDTAGIPQECDDDVVLVNKQSHGKGVLKELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFQNAGIKSDNYLLLATVAVGFVKTVSILVATFLLDRAGRRVLLLCSVSGLIVSLMTLGVSLTVVGHSGSTLRWAIALSIAAVLAYAATFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVISMTFLSLCKAITTGGAFFLFAGVAVAAWIFHYTMLPETRGKTLEEIEGSFGHFWRNPRTKGLRQGNAEVQLKTTAQISTNLD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00812 518 SUPERFAMILY MFS general substrate transporter 15 483 IPR036259 -
Lapu11g00812 518 ProSitePatterns Sugar transport proteins signature 2. 124 149 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PRINTS Sugar transporter signature 410 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PRINTS Sugar transporter signature 119 138 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PRINTS Sugar transporter signature 387 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 NCBIfam sugar porter family MFS transporter 21 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 21 491 IPR045262 GO:0015144
Lapu11g00812 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 475 IPR020846 GO:0022857
Lapu11g00812 518 FunFam probable polyol transporter 4 18 489 - -
Lapu11g00812 518 Pfam Sugar (and other) transporter 28 484 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 ProSitePatterns Sugar transport proteins signature 1. 82 99 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu11g00812 518 Gene3D MFS general substrate transporter like domains 18 488 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00812 Lapu-Chr11 10919731 10921764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00812 9 504 Organic Solute Cotransporters AT3G18830 65.863 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00812 - - gmx:100816478 840.106