Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00806 ATGAGAAATATGAAGGCGTGGAGGGTGCTGTTGTATGTTGCGGTGTTTGAGACGGTGTTGATCGGAATGGGAAGCGGCCACGACTATTGGGACGCATTATCGAAGGCCATTATTTTCTTCGAGGGTCAGCGATCGGGATTCCTGCCGCAGGATCAGAGAATGAGTTGGCGAGGAAACTCCGGTCTCAGTGACGGCTGGAACTACAACACGGATCTCACCGGCGGCTACTACGACGCCGGCGACAACGTGAAATTCGGGTTTCCGATGGCCTTCACCACCACAATGCTGGCCTGGAGCGTGCTGGAATTCGGGGACTTCATGCCTCCCAACGAGCTCAGGAACGCACTCCTCGCAATTCGTTGGGCCACTGACTATCTTCTCAAGACGGTTTCTCAGCCCAATCGGATTTTCGTTCAGGTGGGTGATCCAAATTCAGATCACGATTGTTGGGAGAGGCCGGAGGACATGGACACAGCGAGGACTGCTTATGCTATTGATGCACCAAACGCCGCTTCCGATGTCGCCGGCGAAACTTCCGCCGCACTAGCAGCCTCATCCATGGTGTTCCGGTCATCGGACCCCGGTTACTCAGAGACATTGCTTCGAAATGCTATTACTGCCTTTGAATTTGCAGATAACTACAGGGGTGCTTACAGTGACAATGATAATGTCAAGTATAATGCCTGTCCATATTACTGTGATTTCGATGGCTATGAGGATGAGTTGTTATGGGGAGCTGCATGGCTAAGGAGGGCGACGCAGGACGATAATTTCCTGAACTACATTCAAAGCAATGGCAAAACTCTTGGTGCAGACGACAACATCAATGAGTTTGGTTGGGACAACAAGCATGCTGGCCTCAACGTACTCCTCTCCAAGGAAGTGATAGAAGGAAACATGTACTCTCTTGAGTCCTACAAGTCCTCAGCAGAGAGCTTCATGTGCACACTCATACCTGAATCACCAAGCTCGAACATGGAGTACACACCTGGTGGACTTGTGTACAGACCCGGAGGCAGCAACTTGCAACATGCTACTTCAATTGCTTTTCTTGAATTGGTGTATGCCAATTACCTAACACACACTTCACAAGCCATCAACTGTGGCAATGTCTATGTCAGTGCACAAACTCTTCGCCAACATGCGAAGAGGCAAGTTGATTACATTTTGGGTGAAAACCCAATGGGACTATCTTACATGGTTGGCTATAGCAACTACTATCCTCAACGTATTCACCACCGTGCCTCTTCTTTACCCTCCATCAAGGATCACCCCCAGTTCATTGCATGCAAAGAAGGTTCAATCTACTACAACTCAACAAACCCCAATCCTAATGTACTTGTTGGTGCCATTGTTGGAGGACCTGACGAAAATGATGATTATGTGGATGATCGAGTTGATTTTAGGAAATCTGAACCAACCACGTACATTAATGCACCGTTTGTTGGGGTGTTAGCATATTTTGCTGCAAATCCCAACTTTAGTTGA 1488 0.4839 MRNMKAWRVLLYVAVFETVLIGMGSGHDYWDALSKAIIFFEGQRSGFLPQDQRMSWRGNSGLSDGWNYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVLEFGDFMPPNELRNALLAIRWATDYLLKTVSQPNRIFVQVGDPNSDHDCWERPEDMDTARTAYAIDAPNAASDVAGETSAALAASSMVFRSSDPGYSETLLRNAITAFEFADNYRGAYSDNDNVKYNACPYYCDFDGYEDELLWGAAWLRRATQDDNFLNYIQSNGKTLGADDNINEFGWDNKHAGLNVLLSKEVIEGNMYSLESYKSSAESFMCTLIPESPSSNMEYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSQAINCGNVYVSAQTLRQHAKRQVDYILGENPMGLSYMVGYSNYYPQRIHHRASSLPSIKDHPQFIACKEGSIYYNSTNPNPNVLVGAIVGGPDENDDYVDDRVDFRKSEPTTYINAPFVGVLAYFAANPNFS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00806 495 Gene3D - 26 491 IPR012341 GO:0005975
Lapu11g00806 495 PANTHER ENDO-1,4-BETA-GLUCANASE 12 490 - -
Lapu11g00806 495 SUPERFAMILY Six-hairpin glycosidases 11 490 IPR008928 GO:0005975
Lapu11g00806 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Lapu11g00806 495 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Lapu11g00806 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Lapu11g00806 495 FunFam Endoglucanase 25 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00806 Lapu-Chr11 10873449 10877313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00806 9 491 Glycoside Hydrolase AT1G70710 58.592 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00806 K01179 - gmx:100101849 945.651