Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00802 ATGGATGCTATCAGAAAGCAAGCTTCCAAGCTTCGAGAACAGGTCGCTCGCCAGCAACAGGCTGTTCTGAAGCAATTTGGGAGTGGTGGTTATGGAGGTTCAGATAATGTGGTCACCGATGGAATGGAACTCCAGCTGCACAAGAAACTTGAGAAACTTTATATATCGACACGTGCGGGGAAGCATTATCAAAGGGATATTGTTCGTGGTGTAGAAGGTTATATTGTTACTGGGTCCAAGCAAGTGGAAATAGGAACAAAGTTGTCAGAAGATAGCAGGAAATATGGTGCAGAAAATACATGTACCAGTGGTAATACACTGAGTAGAGCTGCACTAAGTTTTGCGCAAGCGCATGCTCAAACGGAGAAGGAGCGTGGAAACTTACTAAAAGCTCTTGGTACACAGGTTGCAGAACCCTTAAGGGCAATGGTGGTGGGAGCTCCATTGGAGGATGCACGGCATCTTGCTCAACGTTATGACAGAATGCGGCAAGAAGCTGAAGCCCAGGCAATTGAAGTTTCTAAACGCCAGGCAAAAGTAAGAGAAATGCCACCCAGTGCTGAGAATTCTATGAAATTAGAAGCAGCTGAAGCAAAGCTGCAAGATCTGAAGACAAACATGACCATACTGGGGAAGGAAGCAGCTGCAGCATTGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACTCTTCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAAATAGTCCTACAAATACTTGATCAGCTTGAGGGGGAGATGATATCAGAACAACGACGCATTGAAACCCCTGCTATTCCTAGTCTGGATAACAGCATGCCACCACCTCCGTCATACGAAGAAGTGAATGGTGTCTATGCATCTCAGGCACATAATGGATCAACAGATAGCATGGGTTACTTCTTAGGAGAGGCTTTATTTCCATATTCTGCTGTATCCGAAGTGGAGCTAAATCTATCAGTTGGTGATTACATTGTTGTTCGAAAGGTGACAAACAGCGGATGGGCCGAGGGCGAATGCAAAGGCAAGGCAGGTTGGTTTCCATTTAGTTACATTGAAAGGAGGGAACGGGTTCTTGCGAGTAAGGTGGCTGAAGTGTTTTAA 1116 0.457 MDAIRKQASKLREQVARQQQAVLKQFGSGGYGGSDNVVTDGMELQLHKKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGNTLSRAALSFAQAHAQTEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVREMPPSAENSMKLEAAEAKLQDLKTNMTILGKEAAAALAAVEAQQQRLTLQRLIAMVEAERAYHQIVLQILDQLEGEMISEQRRIETPAIPSLDNSMPPPPSYEEVNGVYASQAHNGSTDSMGYFLGEALFPYSAVSEVELNLSVGDYIVVRKVTNSGWAEGECKGKAGWFPFSYIERRERVLASKVAEVF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00802 371 PRINTS Neutrophil cytosol factor 2 signature 327 343 - -
Lapu11g00802 371 PRINTS Neutrophil cytosol factor 2 signature 343 356 - -
Lapu11g00802 371 PRINTS Neutrophil cytosol factor 2 signature 307 327 - -
Lapu11g00802 371 SMART SH3_2 305 360 IPR001452 GO:0005515
Lapu11g00802 371 Coils Coil 1 21 - -
Lapu11g00802 371 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Lapu11g00802 371 Coils Coil 186 213 - -
Lapu11g00802 371 SUPERFAMILY BAR/IMD domain-like 45 258 IPR027267 -
Lapu11g00802 371 PANTHER SH3 DOMAIN-CONTAINING 16 359 - -
Lapu11g00802 371 ProSiteProfiles Src homology 3 (SH3) domain profile. 302 361 IPR001452 GO:0005515
Lapu11g00802 371 SUPERFAMILY SH3-domain 304 359 IPR036028 GO:0005515
Lapu11g00802 371 Coils Coil 220 240 - -
Lapu11g00802 371 Gene3D SH3 Domains 301 361 - -
Lapu11g00802 371 Pfam Variant SH3 domain 309 357 IPR001452 GO:0005515
Lapu11g00802 371 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00802 Lapu-Chr11 10846659 10850483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00802 - - gmx:100777051 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00802 11 10846659 10850483 Lapu11g00802 11 10846659 10850483 ECH