Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00801 ATGGGGAGTTTGGGAGCGATTCTGAAACATCCAGATGACTTTTATCCGTTGCTGAAGCTCAAAATGGCCGCTAGAAACGCCGAGAAGCAGATCCCGCAACAGCCGCACTGGGCCTTCTGTTACACTATGCTCCACAAGGTTTCTAGAAGCTTCGCCCTCGTCATTCAGCAACTCGATACCGACCTTCGCAACGCCGTTTGCATATTCTATCTGGTTCTTCGTGCGCTCGACACCGTTGAGGATGATACTAGCATAGCTACAGATGTCAAGGTGCCAATACTGATAGCCTTTCACCGACATATTTATGATCGTGATTGGCACTTTTCATGCGGCACAAAGGAGTACAAAGTTCTAATGGACCAGATTCATCATGTTTCAACTGCTTTTCTGGAACTTGAAAAGAACTACCAGGAAGCAATTGAGGACATTACAAAAAGAATGGGTGCTGGAATGGCCAAATTTATTTGCAAGGAGGTTGAAACAATTGATGACTATGATGAATATTGTCACTACGTGGCTGGACTAGTTGGACTGGGTTTATCAAAGCTCTTCCATGCCTCTGGTTCAGAAGATCTGGCTTCAGATTCCGTTTCCAATTCAATGGGCTTGTTTCTTCAGAAAACAAACATCATTCGAGATTATCTGGAAGACATCAATGAGATACCCAAGTCACGCATGTTCTGGCCACGACAGATTTGGAGTAAATATGTTAACAAACTCGAGGATTTGAAATATGAGGAGAACTCTATTAAGGCAGTGCAATGCTTAAATGACATGGTCACTAATGCTCTGATGCATGCTGAAGATTGCTTAATATACATGTCTGCTTTAAAGGACCTGGCTATATTTCGCTTTTGTGCTATACCCCAGATAATGGCAATTGGAACACTTGCATTATGTTACAATAACATTGGGGTCTTCAGAGGTGTAGTTAAAATGAGGCGAGGTTTAACTGCCAAGGTGATTGACCGAACAAAGACTATGGCTGATGTCTATGGCGCTTTCTTTGATTTTGCTTCTATTTTGGAGTCCAAGGTTGACAAAAATGATCCCAATGCGACAACAACATTGAGCAGGGTGGCAGCTATACAGAAAACTTGCAGAGAATCTGGTCTCTTGAGTAAAAGGAAATCATACATTGTGAAGAATGAAAATGGATATGGCTCGACCGTGATTGTCTTGCTGGTCATCATGGTTTCCATCATTTTTGCTTATCTGTCTGCTAACCACCATAATAACTAG 1242 0.4235 MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPQQPHWAFCYTMLHKVSRSFALVIQQLDTDLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMDQIHHVSTAFLELEKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGLSKLFHASGSEDLASDSVSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKLEDLKYEENSIKAVQCLNDMVTNALMHAEDCLIYMSALKDLAIFRFCAIPQIMAIGTLALCYNNIGVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASILESKVDKNDPNATTTLSRVAAIQKTCRESGLLSKRKSYIVKNENGYGSTVIVLLVIMVSIIFAYLSANHHNN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00801 413 ProSitePatterns Squalene and phytoene synthases signature 1. 168 183 IPR019845 GO:0016765
Lapu11g00801 413 SFLD Isoprenoid Synthase Type I 36 325 - -
Lapu11g00801 413 CDD Trans_IPPS_HH 38 320 IPR033904 GO:0004311
Lapu11g00801 413 SUPERFAMILY Terpenoid synthases 36 367 IPR008949 -
Lapu11g00801 413 ProSitePatterns Squalene and phytoene synthases signature 2. 201 229 IPR019845 GO:0016765
Lapu11g00801 413 PANTHER FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE 1 405 IPR044844 GO:0004311
Lapu11g00801 413 NCBIfam squalene synthase 36 367 IPR006449 GO:0004310|GO:0008610
Lapu11g00801 413 SFLD Squalene/Phytoene Synthase Like 36 325 IPR002060 GO:0009058
Lapu11g00801 413 Gene3D Farnesyl Diphosphate Synthase 34 371 IPR008949 -
Lapu11g00801 413 FunFam Squalene synthase 1 34 370 - -
Lapu11g00801 413 Pfam Squalene/phytoene synthase 45 314 IPR002060 GO:0009058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00801 K00801 - gmx:547940 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00801 11 10836793 10843579 Lapu11g00801 11 10836793 10843579 ECH