Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00799 ATGGCATTCAAACTCAAACCACTGTCTCTTCCTTCCTCTCTTCACTCCTCTCCTCGCCAAAACCCTAATTTCACACTTTCAAACCATCGTCTTCCTCGTCTTTTCTCTTCACATTCTCTTCCTCTTAGTCTCTGTCTCTCCCGCGGGGCTTCTCCATCCACGTTTCATCGCACTGCCTGCGTAACCGCTCGCGCATTTCGAAGCGATGAACTCGCTGACGAAGGCGAAGAAGAAGAAAAAGAAGAAGGAATATCGAGGCAGGGTGAGAAAAAGGAACTAGCGAATCAAGGGATATGGGATCAGATAAAGGAAATTGTGATGTTTACAGGTCCAGCAACTGGACTTTGGATATGTGCACCACTTATGAGTCTCATTGATACTGCAGTTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATCGCCACTTCCAATATGGTTGCCACTGCACTTGCTAAACAGGACAAACAAGAAGTACAACATCACATATCTATCTTGGTTTTTGTTGGGTTATCTTGTGGCGTTGTGATGCTTTTGTTCACAAGGATATTTGGTGCTGCGATAATAACTGCTTTCACTGGGTCAAAGAATGCACACATAGTACCTGCAGCTACCAGTTATGTAAAGATTCGAGGCTTGGCATGGCCTGCTTTACTTGTTGGATGGGTTTCTCAAAGTGCCAGGTGCAATCTTGGCATGAAAGATTCCTTGGGACCCTTGAAGTCTTTGGCTGCTGCTACTGTTATAAATGTCATTGGTTGCATTGTTTTGTGCACCTGGTTAGGCTATGGAATTGTTGGGGCAGCGTGGGCTACAATGTTTTCACAAGTTGTTGCTGCTTACATGATGATTCAAACTCTGAACAAAAAGGGATATAATGCACTTGCCTTCTCCATTCCATCAGGGAAGGAACTTGTGATGATATTCGGGCTTGCTGCCCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCTCTGCTTATATATTTTGCTACATCATTGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACTGTATGGGGTGAACCTCTCTCCCAAACTGCTCAGTCATTTATGCCTGAATTGATATTTGGAGTAAATCGCAGTTTGTCAAAGGCCCAATTGCTTCTAAGGTCTCTTCTGACAATCGGTGTCATACTTGGATTATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCATACATTTTTACACCTGATCGGATGGTCATTCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCGCTGTCCATAACCCCCCCTACTCACAGTCTCGAGGGAACATTGCTGGCTGGGCGGGACCTGAGATTTATAAGTTTGTCAATGACTGCATGCTTTTGCGTGGGTTCACTAGTATTATGGGCCATGAGTAGTAGATTTGGTTTACTAGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGCTTTTCAATTGCCCTCCAGCGCCTTCTTTCTCCCAAGGGCGTTTTATACTCAGGAAGTACAGATCAGCATAAGCTGCGAAAGCTAACCACCACTTAA 1644 0.441 MAFKLKPLSLPSSLHSSPRQNPNFTLSNHRLPRLFSSHSLPLSLCLSRGASPSTFHRTACVTARAFRSDELADEGEEEEKEEGISRQGEKKELANQGIWDQIKEIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILVFVGLSCGVVMLLFTRIFGAAIITAFTGSKNAHIVPAATSYVKIRGLAWPALLVGWVSQSARCNLGMKDSLGPLKSLAAATVINVIGCIVLCTWLGYGIVGAAWATMFSQVVAAYMMIQTLNKKGYNALAFSIPSGKELVMIFGLAAPVFMTMMSKVAFYSLLIYFATSLGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIFGVNRSLSKAQLLLRSLLTIGVILGLLLGIVGTSVPWLFPYIFTPDRMVIQEMHKVLIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTACFCVGSLVLWAMSSRFGLLGCWFSLAIFQWARFSIALQRLLSPKGVLYSGSTDQHKLRKLTTT* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00799 547 CDD MATE_DinF_like 103 526 IPR044644 -
Lapu11g00799 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 74 529 IPR044644 -
Lapu11g00799 547 MobiDBLite consensus disorder prediction 1 23 - -
Lapu11g00799 547 NCBIfam MATE family efflux transporter 111 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu11g00799 547 MobiDBLite consensus disorder prediction 71 90 - -
Lapu11g00799 547 Pfam MatE 117 274 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00799 Lapu-Chr11 10812816 10820034 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00799 K03327 - gmx:100778835 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00799 11 10812816 10820034 Lapu11g00799 11 10812816 10820034 ECH