Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00783 ATGAATCGGGAAAAGTTGATGAAGATGGCTGGTTCGGTTAGAACTGGAGGAAAGGGTACCGTGAGAAGAAAGAAGAAGGCTGTCCACAAGACAACAACCACAGATGACAAAAGGCTTCAGAGCACTCTGAAGAGAATAGGGGTGAATGCCATTCCTGCAATTGAGGAAGTCAATATCTTTAAGGATGATGTAGTTATCCAGTTTTTAAATCCCAAAGTTCAAGCATCTATTGCTGCAAATACCTGGGTTGTCAGTGGTTCTCCACAAACAAAGAAGTTGCAGGATATACTCCCCAGCATTATCCACCAATTAGGACCAGATAACTTGGAAAACCTTAAGAAGCTTGCAGAGCAATTTCAGAAGCAGGCTCCTGAAGGAGCTGCAGGTTCAGCCACAGCTCAAGAGGAGAATGACGACGACGTCCCAGAGCTTGTTCCAGGACAGGATTTTGAGACAGCTGCCGAGGAGACCAAGGCGTCTTAG 483 0.4576 MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGAAGSATAQEENDDDVPELVPGQDFETAAEETKAS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00783 160 Pfam NAC domain 36 91 IPR002715 -
Lapu11g00783 160 CDD NAC_BTF3 4 119 - -
Lapu11g00783 160 SMART NAC_2 36 91 IPR002715 -
Lapu11g00783 160 MobiDBLite consensus disorder prediction 118 160 - -
Lapu11g00783 160 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 157 IPR039370 -
Lapu11g00783 160 Gene3D - 48 104 IPR038187 -
Lapu11g00783 160 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Lapu11g00783 160 MobiDBLite consensus disorder prediction 1 30 - -
Lapu11g00783 160 FunFam Transcription factor BTF3 homolog 48 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00783 Lapu-Chr11 10685166 10688581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00783 K01527 - gmx:100500153 306.219