Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00775 ATGAGTAATTTTGATTATGCAAAAACAGGTATTAAGATGGAATATTCAGAGGATGATAAGAAAACAAAGCTGGGCTCTTTAAAGAAGGTAGCAATCAGTGCATCTTCAAAGTTCAAGAATTCCTTGCATAAGAAGGGGAGGAGGCATAGCAGGGTTATGTCTATTGCTATTGAGGATGAAGTTGACGCAGGAGAGTTGAAAATAATTGATGCTTTTCGCCAAACACTTATCTTGGAAGAGTTATTACCCTCAAAACATGATGATTATCATATGATGTTAAGGTTCTTGAGAGCAAGAAAGTATGACATTGAGAGAACAAAACAAATGTGGGCAGATATGCTTCAGTGGAGGAGGGAGTTTGGTGCTGACACAATTATGGAGGATTTTGAATTCAAGGAGATAGAAGAAGTTCTAAAATACTACCCGCAAGGGCATCACGGAGTTGATAAGCAAGGGCAACCTGTTTACATAGAAAGGTTGGGTCAGGTTGACTCTAACAAGCTGTTGCAAGCCACAACTTTGGATCGCTATCTTAAGTACCATGTGAGAGAGTTTGAGAGGACATTCGCTGTTAAGTTCCCTGCCTGTTCCATCGCAGCCAAGAAACACATTGACCAAAGCACAACTATCTTGGATGTGCATGGAGTGGGTCTCAAAAGTATGAACAAAGCTGCAAGGGATCTCATCCAGCGTCTTCAGAAGATTGATGGTGACAACTACCCTGAGACCTTAAACCGTATGTTCATCATTAATGCTGGTTCTGGATTTAGGCTGTTGTGGAACACTGTTAAGTCATTCCTTGATCCTAAGACCACCGCCAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCAAGTGAACTTCCAGAGTTCTTAGGTGGTACTTGTACATGTGGAGACAAAGGTGGTTGTTTGCTCTCAGACAAAGGACCATGGAATGACCCAGAAATCTTTAAGATGGTTCAAAATGGCGAAGGAAAATGTAAGAGGAAAACTCTTTCCGGGGTTGAAGTGAAAACCATCCTTGAAGATGATACAGCATGTCAAAAGGAATGCGATTCTTTAAACAAAGAATCTGCAGCCATGGAGCATCCCGGTGCTGCTCCAAAAGTGGCCCTTGCCCCAGTGAATACATCTTGGGAAAAAGCAGAAAAAAATGATGAGTTAACCCTTTCTAAAGATTGTTTGCCCAGGAAGAGTAATTCTAATGGGTTTAGAATCCCATTTAGTGGTGGAATCATGTCGATTCTTATGGGAGTGATAACAGTGATCCGCATGGCAAAGAACATGCCAAGGAAAATCACTGGAGCTGCCTTTTATAGTAACACAGCATATTGTAATGGCAACGAGATGAAAGCACCTGCCATTTGCATGGATGATCAAATGGCCATGATGAAGCGCATGGCTGAACTAGAAGAGAAGGTGAACGTCCTCTCTACGAAACCTGTCATGCCACCTGAGATGGAAGAATTGATGAATAATGCTCTTAACAGAGTGAGCACGCTGGAACAAGAGTTGACTATTACCAAAAAGTCACTTGACGATGCCCTTACCCGACAAGTGGAGCTTCAAGTTCAAATTGACAAAAAGAAAAAGAAGTTCTTCCGCTGGTAA 1635 0.4171 MSNFDYAKTGIKMEYSEDDKKTKLGSLKKVAISASSKFKNSLHKKGRRHSRVMSIAIEDEVDAGELKIIDAFRQTLILEELLPSKHDDYHMMLRFLRARKYDIERTKQMWADMLQWRREFGADTIMEDFEFKEIEEVLKYYPQGHHGVDKQGQPVYIERLGQVDSNKLLQATTLDRYLKYHVREFERTFAVKFPACSIAAKKHIDQSTTILDVHGVGLKSMNKAARDLIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCGDKGGCLLSDKGPWNDPEIFKMVQNGEGKCKRKTLSGVEVKTILEDDTACQKECDSLNKESAAMEHPGAAPKVALAPVNTSWEKAEKNDELTLSKDCLPRKSNSNGFRIPFSGGIMSILMGVITVIRMAKNMPRKITGAAFYSNTAYCNGNEMKAPAICMDDQMAMMKRMAELEEKVNVLSTKPVMPPEMEELMNNALNRVSTLEQELTITKKSLDDALTRQVELQVQIDKKKKKFFRW* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00775 544 Gene3D - 55 120 - -
Lapu11g00775 544 PRINTS Cellular retinaldehyde-binding protein signature 260 279 - -
Lapu11g00775 544 PRINTS Cellular retinaldehyde-binding protein signature 293 302 - -
Lapu11g00775 544 PRINTS Cellular retinaldehyde-binding protein signature 91 113 - -
Lapu11g00775 544 Pfam CRAL/TRIO, N-terminal domain 85 112 IPR011074 -
Lapu11g00775 544 Coils Coil 499 519 - -
Lapu11g00775 544 Pfam CRAL/TRIO domain 139 301 IPR001251 -
Lapu11g00775 544 FunFam SEC14 cytosolic factor 121 333 - -
Lapu11g00775 544 CDD SEC14 134 302 IPR001251 -
Lapu11g00775 544 SUPERFAMILY CRAL/TRIO N-terminal domain 59 129 IPR036273 -
Lapu11g00775 544 Gene3D - 121 332 IPR036865 -
Lapu11g00775 544 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 133 307 IPR001251 -
Lapu11g00775 544 SMART sec14_4 133 304 IPR001251 -
Lapu11g00775 544 SMART CRAL_TRIO_N_2 88 113 IPR011074 -
Lapu11g00775 544 SUPERFAMILY CRAL/TRIO domain 133 329 IPR036865 -
Lapu11g00775 544 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 12 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00775 Lapu-Chr11 10613874 10616956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00775 69 298 Acyl Lipid Metabolism Gene Families AT5G47730 27.197 2.37e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00775 K26544 - gmx:100792335 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00775 11 10613874 10616956 Lapu11g00775 11 10613874 10616956 ECH