Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00761 ATGGGGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTATCACTTAGCGAAAGAGCATGGTTATAGGTCTCGAGCTTCATGGAAGCTGGTCCAGCTCAATTCCAAGTTCCAATTTCTCGAGTCCGCACGCGCTGTCCTCGACCTCTGCGCCGCCCCCGGCGGCTGGATGCAGGTGGCGGTGCAGCGCGTCCCCGTAGACCACCTCGTCATCGGCGTGGACCTTGCGCCCATCGCTCCCATTCGCGGTGCCATCGCCATCCAGGAAGACATCACCAAAACCGAGTGCAAGTCCCGCATCAAGAAGCTCATGAACCAGCACGGATGCCGCGCTTTTGATGTCATTTTGCACGACGGTTCTCCCAATGTCGGTGGCGCCTGGGCTCAGGAAGCCATGAGCCAGAACGCCCTCGTCATCGATGCCGTCAAATTGGCCACTCAGTTCTTAGCCCCCAAGGGTATCTTTGTCACCAAAATTTTCAGGTCGCAAGATTACAGCTCTGTGGTGTATTGCTTGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAGCCTGCGGCTAGTCGATCTGAATCTGCTGAGATATACGTTTTGGGTCTTAGGTACAAGGCTCCTGCCAAGATTGATCCGCGTCTTCTTGATGTAAAGCATCTCTTCCAGGGATCTGTGGAACCGCAGCCCAAGGTGGTGGATGTACTTAGAGATACTAAGCAGAAAAGGCATCGTGACGGCTATGAAGATGGAAACACAACATTAAGGAAGATGTCTTCAGCTTCAAATTTCGTTTGGTCAGATTCTCCTCTGGAGATCCTTGGTTCGGTCACTTCGATAACCTTTACTGATGCAGCTGATTTACCAATCAAGGATAATGAGCTAACAACTGAAGAGGTCAAATCTCTTTGCGATGATTTAAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGAGGATTCACATTAGAAAAGCTCTTTCACCAACTCAAAAGCCTGATCCTACCACTAAAGAACAGACGGAAAATGAGCCGAAGGTGGATGAAGAAGATAGATTACTCAATGAAATGGAGGAACTGACTAATGTAATGGACCGCAAGAAGAAACGTGCAAAGAAGCTTCTTGCTAAAAGAAGAGCCAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATGGATGCAATAGAGGATGGTTATGTAGATCAGGAGTTGTTTTCTCTTTCCTCTATAAAGGGTAAGAAAGATCTGGTAGCTGTTGACAATGCTGATTATGAAGGTGGCGAGGGTGAAGTAGAAGATAGTGACAATGAAGAAGTCCATGAAGGCCCAGAGCATTCATCGAGTGACTTGGAAGATTCTGATGAGGAGCGTGAAAGATACAATGAACAAATGGAAGATTTGCTGGATAAAGCTTATGAGCGGTTTGTGATCAGAAAGGAAGGAAGTACAAAGCAGCGGAAGCGTATTAAAAAATCCTATGATGCAGAGGCCCAACTTTTGGAGGGCGGTGAGGATGTTGATATTGTTGAATCCAAGTATGATTCCGATGAAGATCAGGGTGAGCAAGAAGCAAATCCATTGATGGTGCCGCTTAATGACGGGGCAGAACTCAGCCAAGAGGAGGTCATGAAAAAGTGGTTTAGTCAGGATATCTTTGCTGAAGCTGCAGAGGAAGGAGACTTTGAGAAGGATGAGAGTAAAGATGAAATGGATATAGATGATGAGCCTAAGGAGAAGACATCCATTGCAAAAAAGGTTAAAGAAAATAAAACACAAGCTCCAGCAGTGGTTGATCATCCTCAACCTCAAGCATCATCCAAGACAGTAGATGATTTTGAAGTAGTTCCTGCGCCTGCCACTGATTCAAGTGATGATTCATCTTCTGATGAATCAGAGGAAGATATTGAAACCAAAGCTGAGATATTGGCTTATGCTAAGAAGATGATGAGGAAAAAGCAACGGGAGCAAATATTGGATGATTCATATAACAAGTACATGTTTGATGACGAGGGATTGCCCAAGTGGTTTCTAGATGAAGAGAAGAGACACCGCCAACCAATAAAGCCTATTTCAAAAGAGGAAAGTGCTGCAATGAGAGCGCAATTTAAAGAAATTGATGCCCGTCCTGCAAAGAAGGTGGCAGAGGCCAAAGCACGGAAGAAGCGTGCTGCAATGAGGAAGCTTGAGAAGGTACGGAAGAAGGCGAATGCCATATCAGATCAGACAGAGATATCTGATCGTTCGAAGAGAAAGCAAATTGAACAACTATATAAGAAGGCTGTTCCAAAGAGGCCTAAAAAGGAATATGTAGTTGCAAAGAAAGGTGTACAAGTAAAGACTGGCAAGGGAAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACGTGGAATGGGTAAGGCTGGAAAAGGAGGTTCCAAGGGCAAGGCTCCAAAGGGCAAAGGAGCTCCGAAGGGTAAAGGAGTTCCAAAGGGCAAAGGAGCTTCGAGTGCCTCCTCTGCTAAAAGAGGAAAACAGAGGACTAAATGA 2529 0.4595 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFQFLESARAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKTECKSRIKKLMNQHGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEDGNTTLRKMSSASNFVWSDSPLEILGSVTSITFTDAADLPIKDNELTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPTQKPDPTTKEQTENEPKVDEEDRLLNEMEELTNVMDRKKKRAKKLLAKRRAKDKARKATGMQMDAIEDGYVDQELFSLSSIKGKKDLVAVDNADYEGGEGEVEDSDNEEVHEGPEHSSSDLEDSDEERERYNEQMEDLLDKAYERFVIRKEGSTKQRKRIKKSYDAEAQLLEGGEDVDIVESKYDSDEDQGEQEANPLMVPLNDGAELSQEEVMKKWFSQDIFAEAAEEGDFEKDESKDEMDIDDEPKEKTSIAKKVKENKTQAPAVVDHPQPQASSKTVDDFEVVPAPATDSSDDSSSDESEEDIETKAEILAYAKKMMRKKQREQILDDSYNKYMFDDEGLPKWFLDEEKRHRQPIKPISKEESAAMRAQFKEIDARPAKKVAEAKARKKRAAMRKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAVPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGMGKAGKGGSKGKAPKGKGAPKGKGVPKGKGASSASSAKRGKQRTK* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00761 842 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Lapu11g00761 842 Coils Coil 709 739 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 728 771 - -
Lapu11g00761 842 FunFam AdoMet-dependent rRNA methyltransferase SPB1 19 208 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 568 584 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 722 842 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 503 517 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 436 452 - -
Lapu11g00761 842 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 336 - -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 326 348 - -
Lapu11g00761 842 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Lapu11g00761 842 Coils Coil 348 375 - -
Lapu11g00761 842 Pfam Spb1 C-terminal domain 605 796 IPR012920 GO:0005634|GO:0006364|GO:0008168
Lapu11g00761 842 MobiDBLite consensus disorder prediction 554 634 - -
Lapu11g00761 842 Coils Coil 448 468 - -
Lapu11g00761 842 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Lapu11g00761 842 MobiDBLite consensus disorder prediction 499 534 - -
Lapu11g00761 842 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Lapu11g00761 842 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Lapu11g00761 842 MobiDBLite consensus disorder prediction 423 462 - -
Lapu11g00761 842 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00761 K14857 - gmx:100790741 1319.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00761 11 10528775 10534110 Lapu11g00761 11 10528775 10534110 ECH