Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00747 ATGGCTCAATGCTCTTTTTTATTAATTAGTTTTGATTGTTTAACAGCTGAGTATTCTCCCTTCGCGGGAATTGAAAAGGGAGCTGTTCTTCAGGAGGCCAGGGTTTTTAATGACCCACAACTAGATGCTAGGAGATGTTCACAGGTTATCACGAAACTTTTATACCTACTAAATCAGGGAGAGACATTTACAAAGGTCGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTTCAGTCTCGAGATCTTGGTTTAAGGAGAATGGTCTACCTGATAATAAAGGAACTTTCCCCCTCTGCAGATGAGGTTATTATCGTTACAAGCTCCCTCATGAAGGACATGATTAGCAAGACTGATATGTACAGGGCTAATGCTATTCGTGTCCTCTGTCGCATCACAGATGGAACACTCCTCACCCAAATAGAGCGATATCTGAAGCAAGGAATTGTAGATAAGAATCCAGTCGTTGCAAGTGCAGCCTTAGTTAGCGGCATTCATCTGCTCCAGACAACTCCAGAGATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAAGCTGTTCAGTCAAGGGCAGCTCTTGTGCAATTTCATGCACTGGCTTTGCTGCATCAGAGTTTTGACATTGACACATGGTGGCATACAACATTGCAGATACGGCAGAATGATCGACTAGCTGTTAGCAAGCTGGTTACCAGCTTGACCAGGGGAAATGTCCGCTCTCCTTTAGCCCAGTGCCTTTTGATCCGATATACAAGTCAGGTAATTCGGGAGTCAGGAAATAACGCACAATCTGGAGACCGCCCCTTCTATGATTATCTTGAGAGTTGCCTCCGTCACAAGTCAGAGATGGTGATTTTTGAAGCAGCCAGGGTAATTACGGAGCTCAATGGAGTAACTAGCCGAGAATTAACTCCAGCAATTACAGTTCTTCAGCTCTTCTTGAGTTCGTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCAATGACTCATCCAATGGCAGTAACTAACTGCAATATTGACATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCAACACTTGCCATCACTACCCTATTGAAGACAGGAAATGAATCTAGTGTGGACCGTCTTATGAAGCAGATTACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTCGTTGAAGCAATAAGATCACTGTGCTTGAAGTTCCCTTTAAAATATAGATCTCTGATGAATTTCCTAAGTAATATTCTTAGGGAAGAAGGTGGTTTTGATTACAAGAAAGCAATTGTAGATTCAATTGTGATTCTTATTAGAGATATACCTGATGCCAAGGAAAGTGGGTTGCTTCATCTTTGCGAGTTTATTGAAGATTGTGAATTCACTTATTTGTCCACACAGATTCTGCACTTCCTGGGAGTTGAAGGGCCAAAAACATCCGACCCCAGCAAATATATTCGTTATATTTATAACAGAGTACATCTTGAGAATGCGACTGTTAGGGCCAGTGCTGTTAGCACAATGGCGAAGTTTGGGGCTGCTGTTGATGCATTGAAGCCACGCATATTTGTACTGCTAAGGCGGTGTCTTTTTGACAGTGACGATGAGGTCCGTGACAGGGCAACACTTTATCTGAACACACTTGGGGGTGATGGCGGAGTTGTTGAGACAGATGAAGATGTGAAAGAATTCCTCTTCGGGTCATTTGATATCCCACTTGTCAATCTGGAGACTAGTTTGAAAAACTATGAGCCTTCAGAAGAGTCTTTTGACATTAATTCAGTGTCCAGGGAGGTTAAATCTCAACCTCTTGCAGAGAAGAAAGCCTCTGGTAAAAAGCCTGCCGGTTTGGGTGCTCCTCCTAGCGGGCCCTCATCTACTGTGGATTCCTATGAAAGGCTGCTTTTGTCCATTCCCGAGTTTGCAAACTTTGGGAAGCTTTTTAAGTCTTCAGAACCTGTGGAGCTTACCGAGGCGGAGACAGAATATGCAGTCAATGTTGTTAAACACATTTTTGATAGGCATGTTGTGTTTCAATACAACTGCACAAACACGATACCAGAACAATTATTGGAAGATGTTATTGTAATTGTGGATGCATCTGAAGCAGAAGAGTTCGTTGAGGTGTTCTCAAAGCCTCTTAGATCTCTTCCTTATGATTCACCTGGCCAGACATTTGTGGCTTTTGCGAAGCCCGAGGGATTGCCATCTGCTGGAAAATTGTCTAATGTGCTGAAATTTATTGTTAAAGAGGTTGACCCAACCACTGGTGAGGCTGAAGATGACGGTGTGGAGGATGAATACCAGCTAGAGGATTTGGAGGTTGTCACAGCTGACTACATGTTGAAAGTGGGGGTGTCTAATTTCAGGAGTGCATGGGAAAGCCTGGGCACTGATTATGAGCGAGTGGATGAATATGGTCTTGGTCCCAGGGAGAGTTTGGCTGAAGCTGTAAATACTGTCATCAATCTTCTTGGTATGCAGCCTTGTGAGGGAACCGAGGTAATCCCGCCCAATTCAAGGTCGCACACATGCTTGTTGTCAGGTGTATTCATAGGGAATGTGAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGATGGCCCAAAGGATGTTGCGATGAAACTGTCTGTCAGATCCGAGGATGAAACTGTCAGCGACGCCATCCATGAGATTGTGGCCTGCGGCTAG 2703 0.4384 MAQCSFLLISFDCLTAEYSPFAGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMISKTDMYRANAIRVLCRITDGTLLTQIERYLKQGIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAVQSRAALVQFHALALLHQSFDIDTWWHTTLQIRQNDRLAVSKLVTSLTRGNVRSPLAQCLLIRYTSQVIRESGNNAQSGDRPFYDYLESCLRHKSEMVIFEAARVITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTMAKFGAAVDALKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGGVVETDEDVKEFLFGSFDIPLVNLETSLKNYEPSEESFDINSVSREVKSQPLAEKKASGKKPAGLGAPPSGPSSTVDSYERLLLSIPEFANFGKLFKSSEPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEDVIVIVDASEAEEFVEVFSKPLRSLPYDSPGQTFVAFAKPEGLPSAGKLSNVLKFIVKEVDPTTGEAEDDGVEDEYQLEDLEVVTADYMLKVGVSNFRSAWESLGTDYERVDEYGLGPRESLAEAVNTVINLLGMQPCEGTEVIPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDETVSDAIHEIVACG* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00747 900 Pfam Adaptin N terminal region 29 553 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lapu11g00747 900 Gene3D - 23 329 IPR011989 -
Lapu11g00747 900 FunFam Coatomer subunit gamma 782 898 - -
Lapu11g00747 900 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 785 897 IPR009028 GO:0006886|GO:0016192|GO:0030117
Lapu11g00747 900 PIRSF Gamma-COP 14 898 IPR017106 -
Lapu11g00747 900 Gene3D - 350 567 IPR011989 -
Lapu11g00747 900 FunFam Coatomer subunit gamma 628 781 - -
Lapu11g00747 900 SUPERFAMILY Clathrin adaptor appendage domain 630 784 IPR013041 -
Lapu11g00747 900 Gene3D Coatomer, gamma subunit, appendage domain 629 781 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lapu11g00747 900 FunFam Coatomer subunit gamma 23 329 - -
Lapu11g00747 900 FunFam Coatomer subunit gamma 346 554 - -
Lapu11g00747 900 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 783 897 IPR032154 -
Lapu11g00747 900 PANTHER COATOMER SUBUNIT GAMMA 16 898 IPR017106 -
Lapu11g00747 900 MobiDBLite consensus disorder prediction 607 631 - -
Lapu11g00747 900 Gene3D - 782 898 IPR012295 -
Lapu11g00747 900 Pfam Coatomer gamma subunit appendage platform subdomain 635 780 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lapu11g00747 900 SUPERFAMILY ARM repeat 27 577 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00747 Lapu-Chr11 10427485 10435835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00747 K17267 - gmx:100791801 1578.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00747 11 10427485 10435835 Lapu11g00747 11 10427485 10435835 ECH