Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00745 ATGGAGGAGAAACGCCGCGACCCTCCTCCCTCCGCCGCAGATTCCCCGGCATCGGAGCCTGCATCATCTCGCCGCCGCGCCGGAGCTAACAAGCGCAAGTCCGCCGCTCTCAGCGCCTCCGGTTCCTCCTCCGCCCCCTCCAAACGCGCGGCTCGCGACAAGGCCTCGCCGCTCCACCCTCCTCCCCTCCACAATGGCCCCCTCACCCGAGCCCGACAAACCCCCACCTCCCTCGCCGCCGCCTCCTCTTCCGCCGCCGCTTCCGCTCCCGCCGCTGTCAAACACTCCGAACGCACCCACCCCTCCGCCGCCGACTCGGCCGCGCTCGCCGAGCAGCTCAGAAAGGAGAGCGAGTGGGAGACTCTGGAGGCGGCGATTGAAGCGGAATTCGAAGCCATCAGATCTCGCGGTGCCAATGCGCACGTGGTTCCCACTCATTGCGGTTGGTTTTCATGGTTGTATATCCATGAAATTGAGAAGCAAATGTTGCCTTCTTTCTTTAATGGCAAAACTGAAAATCGGACGCCTGATGTATACATGGAGATACGGAATTGGATAATGAAGAAGTTTCATTCAAATCCAAATGTGCAAATTGAATTGAAAGATATGTCACAGCTTAATGTTGGAGACGTGAATTCTAGGCAAGAGGTAATGGAGTTTTTAGACTATTGGGGTTTAATTAACTTCCACCCATTCCCTTCAATGGATTCTGCTGTGACCACTGCCAGTGATGATGGGGAAACAGAAAAGAGTTCTTTGCTTGAAAAATTGTATCACTTTGAAACTCTCCAACTATGTCGACCTGTTCAAAGGTCTAGCCAAATGACTCCAGCTACGGCCTCTGGCTTGTTTCCAGAGTCTGCAATTGCTGAAGAGTTGGTGAAACAAGAGGGTCCAGCTGTTGAGATGCTTGAGTACCATTGCAACTCATGTTCTGCTGATTGTTCTCGCAAGCGTTACCATTGCCAGAAGCAGGCTGATTTTGATCTATGTTCCGACTGCTTTAGTAATAGAAGATTTGGTTCTGGCATGTCTTCATTGGATTTTATACTCATGGAACCAGCTGAAGTTGCAGGGGTGAATGGTGGAAAGTGGACTGATCAAGAGACCCTTCTGCTCCTTGAAGCCTTAGAACTTTATAAAGAAAATTGGAATGAAATTGCAGAACATGTTGGAACAAAAACAAAAGCTCAGTGCATATCGCACTTTGTTCAAATGCCAATTGAGGATGCCTTTGTTGAATGTGATGATAATGTTGATGCTGGTTGCAAAGAACCTACAGATCCAGTTGTAACAAACAATGACTCATCTATGGACAAGGATGCTTCAGAGTGTATTGAAAATGACAGTAGTGATGGCATCAAAGACCCTGATAAAACTTCCAAGGCTGAGGATGTTGAAGTGAAGGTGAATCAGGAGGAGAATCTAAAGCTACAAGATGGCGGTGATGAGAAAGCTAGCGAGGGAGATTCTAAATCAGAAGATGCTCTTAAGGGGAAGTCTGATCAGGAAGCAGGCAATGAATGTGCTATAAGTGCTCTTAAGGAAGCGTTTGCTGCTGTTGGTTATTCTCCTGGACCTGAAGGCCCTTCTTCATTTGCTGAAGTGGGTAATCCTGTCATGGCACTGGCAACTTTCCTTGCACACTTGGTGGGTTCTGATGTGGCTGTTGCTTCAGCTCATAGCTCCATTAAATCCATGTCAAGAAATTCTCCTGGCACTGACCTTGCTGCAAGGTGTTGCTTTCTTCTAGAAGATCCGCCAGATAATAAGAAGGAACCAGCTAGTTCTGAGAGGGATTCTAAAAGTGACGGAGATCAGGATGAAGTAAATATAAAGAAGGATAAACCAATGTTGGATGATAAAGATTTGCCAAATGATCACAATAATAAGAAAACTGGAAGTTACACTTTAGAAGACAAGGGACAGCTGGCTTCTACAGATGATGCAGCCTCAGAAAAGACAATTTCTTCAAAGGAGCAACCAATGGTTAATCATGAAGGTGGGCTTGACAATTGCAATGTTCTCATCGATGCAAAGCTATCCAATGATCAAGCACCAGGCACTGTGCTTAATTCAGGTGATTCAACATCCAAGGCTGAAAATAAATCTAATTCCGACCAGGTTCAGGAGGGAACCTTAATTGAAGAACCTTGTCCTTCTGCCAAGGGCGTATGTGTGTCTGATTCTCTTCCATCAGAGAAGAAAGAACTTCAATCACTTAAATCCAATTTTCCAGGAGAGCATCCAAAGCCAGTAGAGACATCAAAATGTGAGATAGTCTCTGATTCTAATCCCCCTACTAAGAGCAAGTCTCCACAATCTACAAATCCAGTTTGTGAATCTGTAGAAACAACAGACTCAGGCATGGTTGTTGATGGAGTTTCTAATTCCTTGCCGTCAGAAAAGGTTGACTCTCAGGAACTATTTACAACAAAATCATCCCAATGTAATGGGACTGAAAAGGATGTAGATATGATGTCACCATCAAATCCAGTTAGACCAAATTCTGGTGCTGAAAATGGTGCAAATACAGGGGCAGGTAAAGATCATGCAGATAATGGAGCAAAAGTGGAAGATAATGATACAAAGATTAAACAGGATAGCAATTTTGAGAAGATGAAACGGGCTGCAGTTTCTACACTTGCTGCAGCAGCAGTAAAGGCCAAACTTCTTGCAAATCAGGAAGAAGACCAAATCCGACAGCTTACTTCCTTGTTGATAGATAAACAGTTGCACAAGTTGGAAACTAAGTTGGCTTTTTTCAACGATGTGGAGAATGTGGTGATGAGGGCAAGGGAGCATGTAGAGCGATCACGGCATAAGCTTTATCATGAGCGTGCTTTGATTATTGCATCACGGCTTGGTATACCGTCTTCCTCCACTAGAGGTGTACCACCAACTATACCAACTAATAGAATTCCTACAAATATTGCGAACTCACTCCCAAGACCCCAAATGATGATGAGTCCACAAAGGCCACTTATTTCTAGACCTGCCGGCACTGTAGCTACTACTCTTCAAAACCCATTAGCATCTTCGACTGCAGCAGGAAATTCAGTTCGGCCATCTAACCAGGAAAAACTTTCTTCTGTTGGGACAAAATAA 3108 0.455 MEEKRRDPPPSAADSPASEPASSRRRAGANKRKSAALSASGSSSAPSKRAARDKASPLHPPPLHNGPLTRARQTPTSLAAASSSAAASAPAAVKHSERTHPSAADSAALAEQLRKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKTENRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDVNSRQEVMEFLDYWGLINFHPFPSMDSAVTTASDDGETEKSSLLEKLYHFETLQLCRPVQRSSQMTPATASGLFPESAIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCISHFVQMPIEDAFVECDDNVDAGCKEPTDPVVTNNDSSMDKDASECIENDSSDGIKDPDKTSKAEDVEVKVNQEENLKLQDGGDEKASEGDSKSEDALKGKSDQEAGNECAISALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGSDVAVASAHSSIKSMSRNSPGTDLAARCCFLLEDPPDNKKEPASSERDSKSDGDQDEVNIKKDKPMLDDKDLPNDHNNKKTGSYTLEDKGQLASTDDAASEKTISSKEQPMVNHEGGLDNCNVLIDAKLSNDQAPGTVLNSGDSTSKAENKSNSDQVQEGTLIEEPCPSAKGVCVSDSLPSEKKELQSLKSNFPGEHPKPVETSKCEIVSDSNPPTKSKSPQSTNPVCESVETTDSGMVVDGVSNSLPSEKVDSQELFTTKSSQCNGTEKDVDMMSPSNPVRPNSGAENGANTGAGKDHADNGAKVEDNDTKIKQDSNFEKMKRAAVSTLAAAAVKAKLLANQEEDQIRQLTSLLIDKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPSSSTRGVPPTIPTNRIPTNIANSLPRPQMMMSPQRPLISRPAGTVATTLQNPLASSTAAGNSVRPSNQEKLSSVGTK* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00745 1035 CDD ZZ_RSC8 306 350 IPR041984 -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 636 662 - -
Lapu11g00745 1035 ProSiteProfiles SWIRM domain profile. 141 238 IPR007526 GO:0005515
Lapu11g00745 1035 SMART sant 361 409 IPR001005 -
Lapu11g00745 1035 Pfam Zinc finger, ZZ type 305 340 IPR000433 GO:0008270
Lapu11g00745 1035 CDD SANT 381 406 IPR001005 -
Lapu11g00745 1035 Gene3D - 360 411 - -
Lapu11g00745 1035 Gene3D - 147 232 IPR036388 -
Lapu11g00745 1035 ProSiteProfiles Zinc finger ZZ-type profile. 303 357 IPR000433 GO:0008270
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 758 843 - -
Lapu11g00745 1035 ProSiteProfiles Myb-like domain profile. 357 407 IPR001005 -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 69 84 - -
Lapu11g00745 1035 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 360 402 IPR017930 -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 35 49 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 685 712 - -
Lapu11g00745 1035 SUPERFAMILY Homeodomain-like 360 411 IPR009057 -
Lapu11g00745 1035 Gene3D - 300 349 IPR043145 -
Lapu11g00745 1035 ProSiteProfiles SANT domain profile. 364 411 IPR017884 -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 1011 1035 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 425 504 - -
Lapu11g00745 1035 Pfam Myb-like DNA-binding domain 363 405 IPR001005 -
Lapu11g00745 1035 ProSitePatterns Zinc finger ZZ-type signature. 308 334 IPR000433 GO:0008270
Lapu11g00745 1035 SMART zz_5 302 346 IPR000433 GO:0008270
Lapu11g00745 1035 Pfam SWIRM-associated region 1 881 958 IPR032451 -
Lapu11g00745 1035 SUPERFAMILY RING/U-box 298 351 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 1 110 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 584 670 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 585 635 - -
Lapu11g00745 1035 Pfam SWIRM domain 144 229 IPR007526 GO:0005515
Lapu11g00745 1035 FunFam SWI/SNF complex subunit SMARCC2 isoform C 361 411 - -
Lapu11g00745 1035 PANTHER SWI/SNF COMPLEX-RELATED 748 953 - -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 685 862 - -
Lapu11g00745 1035 SUPERFAMILY Homeodomain-like 148 230 IPR009057 -
Lapu11g00745 1035 MobiDBLite consensus disorder prediction 440 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00745 Lapu-Chr11 10411236 10418358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00745 306 403 EF-hand Containing Proteins AT3G07740 37.069 1.26e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00745 K11649 - gmx:100799723 1613.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00745 11 10411236 10418358 Lapu11g00745 11 10411236 10418358 ECH