Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00728 ATGAACGCTTTGATTGCCATAAACTCCTCAAATCCATGTCTTCCCAAAACCCATTTCCTCAAAGTCTCTATCTTTCACCCCTTCTTCAAATTCAACCCATTCTCACACCCATACAACAACACCCATGCCCTTGCTGCAAAGACAACCCACAAGCTTCCTTTCACCATCAGCTGCAAGCTCAAAAACTCTCAAGATGTGAAAAACAAAGGGAAGAGCGTTTCTCAGAAGATTGTCTTATCAGAAGCTTCCCCTCCACCACTCACTGATGTTGATGGCACCAATGGTGACAGTGGGGATGTTCCACAAAGCTCAGAGAAAAAAAAGAGAGGCCCTTTTGGGGTGCTCAACATGTTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCTTTGGCTATTGCGGACATGTTCGCTGCTGCTGCTTTGATGGCTTTGGGAACAATTATTGAACAAGGTGAAGCCCCTGACTTTTATATCCAGAAATACCCTGAAGATCATCCCGTCTTTGGATTTTTTACTTGGAGATGGATTCTTGCCCTTGGTTTTGATCACATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCTCTCATGGTCTGCACATACACAACTCAACTCCCCATCATCAAGGTTTCAAGAAGATGGTCATTTTCGCATTCTGCTGAGGCCATACGCAAGCAAGAATTTTCAGAATCACTGCCAAGAGCATCAATCCAAGATGTTGGTACTATATTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCTTTTAAAGGACTTGCAGGTCGGTTGGCCCCTGTTGGAGTTCACATAGCACTGCTACTTGTAATGGCTGGAGGAACTGTTAGTGCAGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTTCTGTCTCCTTCTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTACGAGAGTGGAGAGGTTTCACAGTTCCACACTGATCTTTCCCTTCGTAACTTGGATGGGAAGGAAATAATGAGGAAAACAATCAGTGTAAATGATCCTTTAAGATATGGTGGTATTACCATATATCAGACAGATTGGAGTATTTCGGCTCTGCAAATTCTGAAGGATAATGAAGGACCGTATAACCTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTTTGGTACCTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTACAGTCAATTGTCCTTTATGATACGGAAGGAAAATTTGTGGGAGTTAGACGGCCTAGTTCAAAGCTCCCAATCAACATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGAAGCAGTGGCTTGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCTTCATTGGAGGAAAGACTAACAGAGCAAAGATGGAGTTTCCAGAGGAGATGAACCGCTTACTTGATAAAGTCCCTGAAATTGTTGAATCAACTGTCTAA 1677 0.4323 MNALIAINSSNPCLPKTHFLKVSIFHPFFKFNPFSHPYNNTHALAAKTTHKLPFTISCKLKNSQDVKNKGKSVSQKIVLSEASPPPLTDVDGTNGDSGDVPQSSEKKKRGPFGVLNMFRRKTLQILSSLPLAIADMFAAAALMALGTIIEQGEAPDFYIQKYPEDHPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMVCTYTTQLPIIKVSRRWSFSHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLSPSGFLSSPTEAFNTEIHVNRFYMDYYESGEVSQFHTDLSLRNLDGKEIMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDTEGKFVGVRRPSSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFIGGKTNRAKMEFPEEMNRLLDKVPEIVESTV* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00728 558 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 119 548 IPR023494 -
Lapu11g00728 558 MobiDBLite consensus disorder prediction 82 108 - -
Lapu11g00728 558 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 69 555 IPR023494 -
Lapu11g00728 558 Pfam ResB-like family 431 543 IPR007816 -
Lapu11g00728 558 Pfam ResB-like family 131 395 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00728 20 555 Miscellaneous Gene Families AT1G49380 67.161 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00728 K07399 - gmx:100807003 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00728 11 10268973 10274633 Lapu11g00728 11 10268973 10274633 ECH