Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00706 ATGGCTTCGCTTCTGAAAACTCTACGTCCCGGTGTGCCTTCAGTTCATGATGCTGGTGATGATTTCAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGCCCTCCTCTCAGCTATTCCATCCCAGAAATTCTTCCTTTCAACCTTGACCAAATCCCACTAGCACCTGTTGCTCATTCTCCCCCTCACAACTTGTTCCTCCCAGTTATCCAACCCTTTAGAAAAACCAATGCAGAATTGACTTCAAGAGCTGCTTCTGTTTCTTCTGATCCACTTTCATGCAAAGAAGAGGATCATGATGATAATGATGATGACGGCCCTATTAGCCCAAAACATGTTAAACGGCCATCCGTGGTGACTTTCCGTGATCCTGAGACAAATGAAATTGTGGAGGATGAAGAGTTTGTAGAATCTGCAAGAGGAGAAAGTAATAGTAACAATAGTAGTAGCAATAGTAATCGTGTGAGGCCGCATGCTGAGAGAGGTGGGAAGAAGGGTTCGTGCTATCGATGCCTTAAAGGGAGTCGTCTAACTGAGAGGGAGGTCTGCATTGTTTGCTGTGCAAAGTTTTGTCGCAACTGTGTGCTTAGAGCAATGGGGTCCATGTCCGAAGGCAGAAAATGTATCAGTTGCATTGGTTATAGAATTGATGAGAACATGCGAGGGAAGCTTGGAAAACCTTCTCGGATGCTCAAGTACTTGTTCTCTAATGGGGAAGTGAAACAAATCATGAAGGATGAGATGTTTTCATCTGGCTTTTGGGGAAAGGAAGGTCAACGGCCAAGTCAAATTATTAGCCCAGAGTTGGAGGTTGGGGGTCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGACGTAACTATCAATGGTCGAGAGATTACCAAAGAAGAGCTATGGTTACTGAAGGTGTGGGCAAGAGTGCCATGTGATGGAACAACTGACTTTTGGGTGACCCATGATGGATCGTACATGGAAGTGGGACAGAAGAATGTCAAGGGGCATATATGGGCGAAGTCTACAGTGAAGCTTGCTTCTCTAGTTCTGTCCCTGCCAGTTCCTTCTAGCTCTTTAACTCCTGCTCCCGAAGCAGAAAATGGAATTAGCCAACAGAAAATGCTTCACAAATTTTTACTTGTTGGTTCTGTCAATTCTGGATCATGTACCATATATAAACAGGCCAAGCTTCTGTACAATGTTCCTTTCTCTGTAGTCGAGCTCCAAAACATTAAGCTGGTAATTCAAAGCAACTTGTATAGGTACCTTGGAATTATACTAGAGGCGCGAGAAGTTTTTGAAGATAGTTTGTATAAAAAAAGTAACGACCAGCATGTTGGTGAATCAACTTCTTCTGGGATTACTGGAGAAATTATTGACAAGACAACCTATTCCATCAGTCCAAGACTAAGAACTTTCTCCGATTGGCTACTCAAATACATGATGTCAGGCAACTTGGATGAAATATTTCCAGCAGCTGCTCGTGAATATGCGCCACTGGTAGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACATACAACAGGAGAAATGAAATACAAAATCTGCCAAAAAATGCAAGCTATTTTCTTGAGCGGGCTGTTGAAATTTCCAGGATAGATTATGAACCCTTGGATGTGGACATCTTGTATGCAGAGGGGATAACCCTATCCAATGGCCTTTCTTCTATGGAATTTTCATTTCCTGTGTCAGGTCATGAGGACTCATTGGACCCTGTGTATCAACATGATCCTGCACTCAGGTACCAGCTCATCAGAGTACATCCAAAAAGCCTCGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACTGATGTAGTCTTATTCTCAGTGGCCTTAAGTGACTATGATGAGTACACGGTAGACAGTAATGGAGTTGCTACCAACAAAATTTTAGCAGCCAAACATCTCTTTCAAAACATCATCACTCATAGAGTCTTGAGCAAGACAAAATTTCTTCTAATATTGACCAAGTTTGATCTTCTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAATGTGAATGGTTTTGTGACTTCGATCCAGTTATAAGCCACAACCATAAAACCGCTAGTATTAGTAAACATACCAACCATCCTCCACTGGCTCAACGTGCCTTTCAATACATTGGTATGAAGTTCAAGAGATTGTTCAATTCTCTAACTGGTCGAAAGCTTTTTGTTTCACTGATTACTGGGTTGGAACCTGGTTCTGTTGATGAGGCTCTTAGATATGCCAGAGAGGTTATGGCGTGGGAAAAATGGGACCCCTCTTTGAGAAATGAGAAGTCTGAGATAACATCCACAACTTTTGAGGCAAGCTCTGATGAAAAATATAATAACTATCACCTCTCCTAG 2376 0.4255 MASLLKTLRPGVPSVHDAGDDFSYEYSFAEEYKGPPLSYSIPEILPFNLDQIPLAPVAHSPPHNLFLPVIQPFRKTNAELTSRAASVSSDPLSCKEEDHDDNDDDGPISPKHVKRPSVVTFRDPETNEIVEDEEFVESARGESNSNNSSSNSNRVRPHAERGGKKGSCYRCLKGSRLTEREVCIVCCAKFCRNCVLRAMGSMSEGRKCISCIGYRIDENMRGKLGKPSRMLKYLFSNGEVKQIMKDEMFSSGFWGKEGQRPSQIISPELEVGGHLQRNASNGKTDVTINGREITKEELWLLKVWARVPCDGTTDFWVTHDGSYMEVGQKNVKGHIWAKSTVKLASLVLSLPVPSSSLTPAPEAENGISQQKMLHKFLLVGSVNSGSCTIYKQAKLLYNVPFSVVELQNIKLVIQSNLYRYLGIILEAREVFEDSLYKKSNDQHVGESTSSGITGEIIDKTTYSISPRLRTFSDWLLKYMMSGNLDEIFPAAAREYAPLVEELWRDAAIQATYNRRNEIQNLPKNASYFLERAVEISRIDYEPLDVDILYAEGITLSNGLSSMEFSFPVSGHEDSLDPVYQHDPALRYQLIRVHPKSLGENCKWLDMFEDTDVVLFSVALSDYDEYTVDSNGVATNKILAAKHLFQNIITHRVLSKTKFLLILTKFDLLEEKIEQVPLTQCEWFCDFDPVISHNHKTASISKHTNHPPLAQRAFQYIGMKFKRLFNSLTGRKLFVSLITGLEPGSVDEALRYAREVMAWEKWDPSLRNEKSEITSTTFEASSDEKYNNYHLS* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00706 791 Gene3D - 548 764 IPR027417 -
Lapu11g00706 791 Pfam G-protein alpha subunit 366 753 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lapu11g00706 791 FunFam Guanine nucleotide-binding protein subunit alpha 583 704 - -
Lapu11g00706 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 759 IPR027417 -
Lapu11g00706 791 SUPERFAMILY Transducin (alpha subunit), insertion domain 401 550 IPR011025 GO:0007165
Lapu11g00706 791 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 199 760 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lapu11g00706 791 FunFam Extra-large guanine nucleotide-binding protein 2 408 553 - -
Lapu11g00706 791 Gene3D - 404 547 IPR011025 GO:0007165
Lapu11g00706 791 ProSiteProfiles G-alpha domain profile. 372 771 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lapu11g00706 791 MobiDBLite consensus disorder prediction 104 121 - -
Lapu11g00706 791 MobiDBLite consensus disorder prediction 81 165 - -
Lapu11g00706 791 MobiDBLite consensus disorder prediction 140 156 - -
Lapu11g00706 791 SMART galpha_1 355 740 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00706 Lapu-Chr11 10123568 10127380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00706 - - gmx:100791124 1283.09