Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00697 ATGTCTCCCACACTCTCACTCTCATTCTCTTGCAATCCCAAACACCCAAACTCCCTTTGCTCGGATTTTGCCAACACTTCCACTCTCAGGCTTTCGCCAACGCTTCCGCTTCGTTGCTCTCAGGAAAGAAGCATTGCACCAGTTAAGCTAGATGAAAGCATTGGGGGAATATCAACCACAAACGACCGCGTTTTCAGCGGCAACACTCCGGTGCTTCGGCAAAATGGCCTACCTCCTTTAGTCAATGCATTGAAAGCTTCTGCTGAGCAGAATGTTGCGAGTTTTCACTTTCCTGGACATAACAGAGGGCATGCTGCTCCTGCTTCCTTGACTCGTCTCATTGGAACGAGACCCTATGCGCATGATTTACCTGAGCTTCCGGAGCTTGACAACCTCTTTTGTCCCCAGGGCCCCATTTTAGAAGCACAGACTGAAGCAGCCGAACTGTTTGGATCGTCACATACATGGTTTCTTGTTGGAGGCACTACTTGTGGGATACAGGCAACCATTATGGCTACCTGTTCCCCGGGAGAATTTCTGATTCTTCCAAGGAATTCCCATATATCAGCTATATCTGCTATGGTATTGTCTGGTGCAGTGCCTAAGTACATCATTCCTGACTATGAGAATGACTGGGACATTGCTGGTGGTGTCACTCCTTTACAGGTATTGAAAGCCATCCGGGAATTAGAAATGGAAGGGAAAAAAGCAGCTGCAGTCTTCATCACTTCGCCTACTTATCATGGTATTTGCAGTGACTTAAGCAAGATTTCTGAGCTCTGTCATTCTCGTAAGATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATTTTGGATTTCATTCTGAACTGCCAAACTCAGCCCTCCAGCAAGGGGCTGATCTGACTGTACAGTCAACTCACAAAGTTCTATGCTCTCTTACACAGTCATCTATGCTGCACATGTCACGAAATATTGTAGATAAGGAAAAAATTGGTAGATGTCTCCAAACTCTTCAAACCACAAGTCCTAGCTATCTGCTTTTGGCATCCCTGGATGCTGCCAGAGCTCAACTTAGTGAACGCCCTGATGCTGTATTCAACCAAGCAATTGCATTAGCTTATGAAGCAAAGAACACGCTAAAATCAATCGCTGGTATATCTGTGCTTGAGATTTCTAGCTTTTCAACCTTTCCTGCAATTGATCCATTGCGTCTCACGGTAGGCTTTTGGAAGCTCGGTTTATCAGGTTACGAAGCAGACGAAATTTTATACAGAGATTACGGTGTTATCTGTGAACTTGTTGGGAACAAATCTGTTACTTACGCATTTAATCTTGGGACTTGTAGGGATCATGTCCAAAGACTTCTATTGGGAATAAAGCATTTGGCTGCAACATACTCTTCCATTCAGCAACCTAAAGAGAAAGTGCGTAATGTTCTTGCACCCTTTGATGATATAATCATGAGATTGATCCCTAGAGATGCCTTTTTTACTAGTAAAAGAAAAGTAACAATAAGGGAGAGCATCGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCTGGCATACCAGTGTTGATCCCTGGTGAGGTTATTACCGAAATAGCTGTTGATTATCTTCTATATGTTAGGAGTAAGGGTGCTGATATTAGTGGGGCATCTGATCCCTTACTTTCTTCAGTAGTTGTTTGCAACGTATAG 1686 0.4407 MSPTLSLSFSCNPKHPNSLCSDFANTSTLRLSPTLPLRCSQERSIAPVKLDESIGGISTTNDRVFSGNTPVLRQNGLPPLVNALKASAEQNVASFHFPGHNRGHAAPASLTRLIGTRPYAHDLPELPELDNLFCPQGPILEAQTEAAELFGSSHTWFLVGGTTCGIQATIMATCSPGEFLILPRNSHISAISAMVLSGAVPKYIIPDYENDWDIAGGVTPLQVLKAIRELEMEGKKAAAVFITSPTYHGICSDLSKISELCHSRKIPLIVDEAHGAHFGFHSELPNSALQQGADLTVQSTHKVLCSLTQSSMLHMSRNIVDKEKIGRCLQTLQTTSPSYLLLASLDAARAQLSERPDAVFNQAIALAYEAKNTLKSIAGISVLEISSFSTFPAIDPLRLTVGFWKLGLSGYEADEILYRDYGVICELVGNKSVTYAFNLGTCRDHVQRLLLGIKHLAATYSSIQQPKEKVRNVLAPFDDIIMRLIPRDAFFTSKRKVTIRESIGEVSGELICPYPPGIPVLIPGEVITEIAVDYLLYVRSKGADISGASDPLLSSVVVCNV* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00697 561 CDD Orn_deC_like 79 376 IPR000310 GO:0003824
Lapu11g00697 561 SUPERFAMILY Ornithine decarboxylase C-terminal domain 416 559 IPR036633 GO:0003824
Lapu11g00697 561 PANTHER ARGININE DECARBOXYLASE 74 560 - -
Lapu11g00697 561 SUPERFAMILY PLP-dependent transferases 78 456 IPR015424 -
Lapu11g00697 561 Pfam Orn/Lys/Arg decarboxylase, major domain 78 385 IPR000310 GO:0003824
Lapu11g00697 561 Gene3D - 78 357 IPR015421 GO:0003824
Lapu11g00697 561 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 495 542 IPR008286 GO:0003824
Lapu11g00697 561 Gene3D - 459 558 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00697 - - vum:124823144 949.888