Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00696 ACCTATATAGTTTCTCTTACCTGCATAATCATGCAGCTAACTAGGATGAGGAAGGTTGCAGGGTTTGTGGCAACCTTATTCATGATGATGATGGTGCCAAAAACGGTGAGTGCTGAAAGAATAGGTGACATCGTCACACAACAATTCTTCGACAGCATAATAAATCAAGCTGGTGGTGGTTGTGCAGGGAAGAACTTCTACTCACGTGATGCTTTCCTCAAAGCTCACAATTCCTACAATCGTTTCGGCAATCTCGATAATCAAGATGATTCCAAACGGGAAGTTGCAGCTGCTTTTGCTCATTTCACCCACGAAACTGGACATTTTTGCCACATAGAAGAGATTGGAGGAGCGTCAAGGGACTACTGTGATGAAAGCAACACTGAGTATCCGTGTGTCCCTAACAAAGGGTACTATGGTCGTGGACCTATCCAACTGTCGTGGAACTTCAACTATGGACCAGCAGGACAGAACATCGGTTTTGATGGGTTGAATGCTCCAGAGACAGTGGCCAATGACCCTGTTGTGTCCTTCAAGACAGCATTGTGGTTCTGGTTGGAGTTTGTGCGACCTGTCATGTACCAGGGCTTTGGTGCAACCATTAGAGCCATCAATGGCCAACTTGAATGTGATGAAGCAAACCCTAACACTGTCCAGGCTCGAGTTAATTACTACAAACAGTATTGTTCTCAACTTGGTGTTGCTCCTGGTGACAATCTTGAGTGTTAA 729 0.4513 TYIVSLTCIIMQLTRMRKVAGFVATLFMMMMVPKTVSAERIGDIVTQQFFDSIINQAGGGCAGKNFYSRDAFLKAHNSYNRFGNLDNQDDSKREVAAAFAHFTHETGHFCHIEEIGGASRDYCDESNTEYPCVPNKGYYGRGPIQLSWNFNYGPAGQNIGFDGLNAPETVANDPVVSFKTALWFWLEFVRPVMYQGFGATIRAINGQLECDEANPNTVQARVNYYKQYCSQLGVAPGDNLEC* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00696 242 PIRSF Endochitinase 6 242 IPR016283 GO:0004568|GO:0005975
Lapu11g00696 242 FunFam Endochitinase PR4 29 121 - -
Lapu11g00696 242 CDD chitinase_GH19 45 242 - -
Lapu11g00696 242 PANTHER CHITINASE-RELATED 37 242 - -
Lapu11g00696 242 ProSitePatterns Chitinases family 19 signature 2. 176 186 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu11g00696 242 Gene3D - 40 242 - -
Lapu11g00696 242 ProSitePatterns Chitinases family 19 signature 1. 61 83 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu11g00696 242 Gene3D Endochitinase, domain 2 113 170 - -
Lapu11g00696 242 Pfam Chitinase class I 44 187 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu11g00696 242 Pfam Chitinase class I 195 242 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lapu11g00696 242 FunFam Endochitinase (Chitinase) 113 172 - -
Lapu11g00696 242 SUPERFAMILY Lysozyme-like 41 242 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00696 Lapu-Chr11 10058313 10059387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00696 31 242 Glycoside Hydrolase AT3G54420 69.811 1.23e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00696 K01183 - gmx:100527091 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00696 11 10058313 10059387 Lapu11g00696 11 10058313 10059387 ECH