Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00691 ATGGCCGTCAATGACGCCGATCAATCCAACAGGCCTCACAGAAACCGTCAATCCGGTGCCAAATCCTTCAAGAAGAAGAGTAAGAAGAAGCAGAATCAGGATGCCGGAGGAGAGGATCAGAAAAACCATAACCCTAAGGCATTCGCCTTTTCTTCCTCCAATAAGGCCAAGCGGTTGCAATCACGTGCCGTCGAGAAAGAGCAGCGCCGCCTTCACGCTCCCATCATTGACCGCTCCTACGGCGAACCCGCTCCATACGTCGTCGTCGTGCAGGGTCCTCCTCAGGTTGGGAAGTCACTGTTGATTAAATCTTTGGTTAAGCATTACACGAAGCATAATTTGCCCGATGTTCGAGGTCCAATTACTATTGTGTCAGGGAAGCAAAGGCGGGTGCAGTTTGTGGAGTGTCCAAATGATATCAACGGTATGATAGATGCGGCGAAGTTTGCTGATCTAGCGCTTCTTCTCATAGATGGGAGTTATGGTTTTGAAATGGAGACCTTTGAGTTCCTAAATATATTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTCACCCATCTTGATAAATTCAAGGATGTGAAAAAGTTGAGGAAAACAAAACAAAGACTTAAACACAGGTTTTGGACTGAGATATATGATGGTGCTAAGCTATTTTACTTATCAGGCCTAATTCATGGAAAGTATGTCAAGCGCGAAGTTCACAATCTTGCTCGGTTTATTTCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCACCCTTATGTTTTGGTTGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCATGCAAATGATAAATGTGACAGAAAAGTCACCCTTTATGGTTATCTTAGAGGATGTAATTTGAAAAAGGGCAATAAGGTACACATAGCAGGAGTGGGTGATTATAGTTTAACTGGTATTACTGTTTTACCGGATCCTTGTCCTCTTCCATCTGCTGCTAAAAAAAAGGGACTGCGGGATAAGGAAAAATTATTCTATGGTCCTATGTCTGGACTTGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAACGACCACCTTGTTCAATTCTCAAAAGTTGATGGTGAAAACTCTGATATGACAAGCAAAGGAAAGGACAGAGATGTCGGAGAGGTTTTGGTGAAATCACTACAGAATACCAAATACTCGATCAATGAAAAGCTGGAGAACAGCTTTATCAGTTTTTTTGGTGAAAAGCCTAAAGTGTCATCAGAAGCTCTAACTGATGAACATGGCACAAACAATGATGTAGAACAGAATGAGTATGTTATAAACACAGAGGATTCAGATGGTTCGGAATCATCTGATCAGGATGAAGAGGACACCATGAAAGGGAGTGAAGCCTCTGGTTCTGATGATGAAGATTTACCAAATAGTAATGCTTTGAATGGAGACCAAATACAAGAACATATTGAGTTTCATGATGGAAGACAAAGGCGGAGAGCAATATTTGGAAATGATAATGATCAAAGTGATCTGATGGATTTAGAAGAAGACGAGGATGGTTCTGCCAGTGATGATCTTGCATCTTCAGATTCAGAATCTTCAGAAGAAGAGGAGGAAGATGATAATGATGACACAAATGAAGATGGCATGGGTAATGTTTCCAAGTGGAAAGAGTCTTTGGCAGAAAGAACTCTCTCACGGAAAACTCCTAGCTTGATGCAACTTGTGTATGGGGAATCTACTAATAATTCAACCACTACAAACACAGAGAATGATAATAGTGGAGATGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGATGTGAAAAAGCAAAACACAAGAGATGGATTGAATGATGATGGAATGGTCAACAATGAAGATTGTTCCAAGTGTACACAATTTGTGCATCAGAGATGGGATGAGGAGATTCGCAACCGCTTTGTGTCTGGCAATTTGGCAAAAGCTGCTCTCAGGAATGCATTACAGACAGCTAATGCTGAAGGGGAAAATGATGATGTCTATGGTGACTTTGAAGATTTGGAAACAGGAGAAAAACATGAGAATTATCGGACAGATGATGCTCTTGCAGCAACAACACTCAAGGGAGATGATTTGGAAGCTGAGGAGCGGAGGCTTAAGAAACGTGCTCTCCGTGCAAAATTTGATTCTCAATTTGATGAAGACGCTGAGTCAGCAGAGGAAGACACTGATAATGAAAATGAACGCAAGTTCCATCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAGGAGGAGATTGAACTCCAGAAACAAAGGAATATAGCTGAACTTAATGATCTTGATGAAGATACCCGATTGGAGATAGAAGGCTTCCGAACAGGGACATACCTAAGATTGGAGATTGATGATGTTCCTTGCGAGATGGTTGAATACTTTGATCCATACCATCCAATATTGGTTGGAGGGGTTGGTATAGGGGAGGAAAATGTTGGATATATGCAGACAAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGATCCAATTATTGTATCTGTTGGATGGAGGCGTTACCAGACAACCCCAGTTTATGCCATCGAGGATAGCAATGGAAGGCATCGTATGCTGAAGTACACTCCGGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACTGGGGTTGTAGCCGTTCAGAATTTATCAAACAATCAGGCGACATTTAGGATTACTGCCACTGCAGTTGTGCTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGATTTGAAGGTGCAGCTATTCGAACAGTCAGCGGGATTCGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAATCAAGCAAAAAGGAAGGGTGGGCAACCCAAAGAAGGAATTGCTAGATGCACTTTTGAAGATAAAATCCTGATGAGTGACATTGTTTTCCTGCGTGCGTGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACTGCATTGCAGCCTCGTGAAAAGACCTGGAAAGGAATGAGGACCGTTGCAGAATTGAGAAGAGAACACAATCTTCCTGTTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCTCTTCAAGCAAGTCTTCCCTTTGCATCAAAACCAAAGGATATACCCAAGCGAAAGAAGCCCTTACTTGAAGAGAGAAGGGGAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTACATGCTCTTGTTCAACATCTCCAGTTAATAAATAGTGAGAAGATGAAAAAGCGAAAGCTTAAGGAAGAGAAGAAAAGGAAAGCACTTGAAGTAGAGAGAGCAAAAGATGAGCAGTTGTCGAGGAAGCGCCGGAGAGAGGAGAGACGTGACAAATACCGAGCACAAGACAAGCAGAATAAGAAAATTCGGAGAGCAGAGGTTTGA 3582 0.4193 MAVNDADQSNRPHRNRQSGAKSFKKKSKKKQNQDAGGEDQKNHNPKAFAFSSSNKAKRLQSRAVEKEQRRLHAPIIDRSYGEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANDKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYSLTGITVLPDPCPLPSAAKKKGLRDKEKLFYGPMSGLGDLLYDKDAVYININDHLVQFSKVDGENSDMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSFISFFGEKPKVSSEALTDEHGTNNDVEQNEYVINTEDSDGSESSDQDEEDTMKGSEASGSDDEDLPNSNALNGDQIQEHIEFHDGRQRRRAIFGNDNDQSDLMDLEEDEDGSASDDLASSDSESSEEEEEDDNDDTNEDGMGNVSKWKESLAERTLSRKTPSLMQLVYGESTNNSTTTNTENDNSGDEESDDDFFKPIEDVKKQNTRDGLNDDGMVNNEDCSKCTQFVHQRWDEEIRNRFVSGNLAKAALRNALQTANAEGENDDVYGDFEDLETGEKHENYRTDDALAATTLKGDDLEAEERRLKKRALRAKFDSQFDEDAESAEEDTDNENERKFHRGQANESSYFDKLKEEIELQKQRNIAELNDLDEDTRLEIEGFRTGTYLRLEIDDVPCEMVEYFDPYHPILVGGVGIGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQPKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPREKTWKGMRTVAELRREHNLPVPVNKDSLYKKIERKPRKFNPLVIPKSLQASLPFASKPKDIPKRKKPLLEERRGRGVVMEPRERKVHALVQHLQLINSEKMKKRKLKEEKKRKALEVERAKDEQLSRKRRREERRDKYRAQDKQNKKIRRAEV* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 507 545 - -
Lapu11g00691 1193 Gene3D - 86 248 IPR027417 -
Lapu11g00691 1193 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Lapu11g00691 1193 FunFam BMS1 ribosome biogenesis factor 86 248 - -
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 1140 1193 - -
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 723 750 - -
Lapu11g00691 1193 Coils Coil 1129 1163 - -
Lapu11g00691 1193 SMART DUF663_2 701 1024 IPR007034 -
Lapu11g00691 1193 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 704 1025 IPR007034 -
Lapu11g00691 1193 CDD BMS1 47 276 IPR037875 GO:0005525
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 501 625 - -
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 563 590 - -
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 1 68 - -
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 602 616 - -
Lapu11g00691 1193 Coils Coil 759 779 - -
Lapu11g00691 1193 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 1175 IPR039761 GO:0042254
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 736 750 - -
Lapu11g00691 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 222 IPR027417 -
Lapu11g00691 1193 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
Lapu11g00691 1193 MobiDBLite consensus disorder prediction 442 478 - -
Lapu11g00691 1193 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 248 IPR030387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00691 Lapu-Chr11 10021379 10029950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00691 K14569 - gmx:100792176 1952.56