Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00684 ATGGCCAATGGCAACACTACCCATCTCTTCAAGCTCTTCCTTTTCCTTCTGATTCTTCACTCTGCACTCTCTGAAATTTTCTTCGAAGAGAGATTCGAAGATGGATGGAAGAGCCGTTGGGTGTTATCTGACTGGAAAAGGAGTGAGGGAAAAGCAGGTACCTTCAAGCACACAGCAGGGAAATGGCCTGGAGACCCTGATGACAAAGGTCTTCAGACATATAACGATGCCAAGCATTTTGCCATATCTGCAAAGATACCCGAGATTAACAACAAGGACAGAACACTTGTGGTGCAGTATTCCATTAGGTTTGAGCAGGACATTGAATGCGGTGGCGGTTACATCAAACTTCTCTCTGGTTATGTCAATCAGAAGAAGTTTGGTGGTGATACCCCTTATAGTTTGATGTTTGGACCAGATATATGTGGTACACAGACTAAGAAACTCCATCTTATACTATCATACCAGGGGCAGAATTACCCTATAAGAAAGGAACTGCAATGTGAAACGGATAAATTGACTCATTTCTATACATTTATTCTAAGGCCCGATGCCTCTTATAGTATCCTTGTTGATAACCGGGAAAGAGATTCGGGAAGCATGTATGCAGATTGGGACATTCTTCCTCCAAGGAAAATCAAGGATGTCAAAGCAAAAAAGCCAGCAGACTGGGATGATAGAGAGTACATTGAAGATCCTAATGATGTCAAACCAGAGGGATATGATTCAATTCCAGCTGAAATTCCTGATCCGAAAGCCAAGAAGCCTTCTGACTGGGATGATGATGATGATGGACTATGGAAGCCCTCAAAGATACCTAATCCAGCATACAAAGGACCATGGAAACGCAAGAAAATCAAGAATCCCAACTACAAAGGAAAGTGGAAGATTCCATGGATTGATAACCCAGAATTTGAGGATGATCCTGATCTTTATGTTCTCAAGCCAATAAAGTATGTGGGCATTGAGGTGTGGCAGGTGAAGGCAGGCTCAGTTTACGACAATATCTTAATTTGTGATGACCCACAGTATGCAAAGCAAGCGGTGGATGAATTTATGGCTAATAATAAAGAGGCTGAAAAAGAAGCTTTTGAAGAAGCAGAAAAAGAAAGAAGGGCTAGGGAAGAAGAGGAGGCAAAGAGAGCAAGAGAAGAGGGTGAAAAAAGAAGGAAGGAGAGGGATCATAAATATGGAAATAGGAGGCGTCGTCGGAGGAGAAGTTATGAGAGAACTTCAAGAAGTGTTTATGGGAGCAAATGA 1260 0.4222 MANGNTTHLFKLFLFLLILHSALSEIFFEERFEDGWKSRWVLSDWKRSEGKAGTFKHTAGKWPGDPDDKGLQTYNDAKHFAISAKIPEINNKDRTLVVQYSIRFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSLMFGPDICGTQTKKLHLILSYQGQNYPIRKELQCETDKLTHFYTFILRPDASYSILVDNRERDSGSMYADWDILPPRKIKDVKAKKPADWDDREYIEDPNDVKPEGYDSIPAEIPDPKAKKPSDWDDDDDGLWKPSKIPNPAYKGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPQYAKQAVDEFMANNKEAEKEAFEEAEKERRAREEEEAKRAREEGEKRRKERDHKYGNRRRRRRRSYERTSRSVYGSK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00684 419 MobiDBLite consensus disorder prediction 224 271 - -
Lapu11g00684 419 PIRSF Calreticulin 5 413 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 MobiDBLite consensus disorder prediction 360 419 - -
Lapu11g00684 419 PRINTS Calreticulin signature 105 123 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 PRINTS Calreticulin signature 131 147 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 PRINTS Calreticulin signature 248 270 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 PRINTS Calreticulin signature 286 305 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 PRINTS Calreticulin signature 319 339 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 PRINTS Calreticulin signature 220 233 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 SUPERFAMILY P-domain of calnexin/calreticulin 206 321 IPR009033 GO:0005509|GO:0005515
Lapu11g00684 419 MobiDBLite consensus disorder prediction 248 268 - -
Lapu11g00684 419 FunFam Calreticulin 1b 25 209 - -
Lapu11g00684 419 MobiDBLite consensus disorder prediction 394 409 - -
Lapu11g00684 419 PANTHER CALRETICULIN AND CALNEXIN 11 385 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 FunFam Calreticulin 210 311 - -
Lapu11g00684 419 MobiDBLite consensus disorder prediction 360 393 - -
Lapu11g00684 419 Pfam Calreticulin family 29 263 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 Pfam Calreticulin family 265 338 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Lapu11g00684 419 Gene3D Calreticulin/calnexin, P domain 210 311 IPR009033 GO:0005509|GO:0005515
Lapu11g00684 419 MobiDBLite consensus disorder prediction 224 238 - -
Lapu11g00684 419 ProSitePatterns Calreticulin family signature 1. 103 118 IPR018124 GO:0005509
Lapu11g00684 419 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 223 IPR013320 -
Lapu11g00684 419 ProSitePatterns Calreticulin family signature 2. 135 143 IPR018124 GO:0005509
Lapu11g00684 419 Gene3D - 25 382 - -
Lapu11g00684 419 Coils Coil 349 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00684 Lapu-Chr11 9962635 9969383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00684 8 346 Miscellaneous Gene Families AT5G61790 35.176 1.18e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00684 K08057 - gmx:100802428 711.064