Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00682 ATGGCGGTAGACGATCGGTTCGCACATTTGAACCCTAAGAAATGCGTGGTTTTAGGCGGCAGAGGATTCCTCGGAAGATCCTTGGTCCTCCGGCTGTTGAAACTCGGTAACTGGATCGTCCGAATCGCCGATTCCCCTCACTCTCTCCAACTCCATCACTCCGAGTCTGTCCTCTCCCAAGCTCTCTCTTCCGCACGCGCTTCTTACTTCCACCTCGACCTTACCGATAAGTGCAACATTGTCAAAGTTCTAGAAGGTTCTTCTGTTGTGTTTTTTATGGATGTTGCTGGTATCGATGTCAATGACTTCTATACTTGTTATAAGCTAATAGTTCAAGGTGCAAAGAATGTCATTAGTGCTTGCCGAGAATGTAGAGTGAAACGCTTGATATATAACAGTTCTGCGGATGTTGTATTTGATGGTTTGCATGATATTCGTGACGGAGATGAGTCGTTGGCCTATCCGTGGAAAACTGACAACATGTTAAGTGACCTTAAGGCTCAAGCGGAAGCTTTGATCCTGAGTGTCAATGACATTGATGGCCTATTGACATGCTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACAGAATCTGTTCCATATTTTCTCAAGTTAGCAAGATATGGTTTTGCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGACTTCACCTTTTCTGAAAATGTTACTCATGCCCATATCTGCGCAGAAGAAGCCTTAAATTTCCAAACAGTTTCTGTGGCAGGAAAGGCATTTTTCATTACAAATCACGAGCCTATTCAATTCTGGGAATTTCTCTCGCTTTTGTTAGAAGGTCTTGGATATCGAAGGCCATATGTCAAACTTCCCGCTAAGTTGGCTCAATATATTCTATCAGTTTTGAAGTGGACACATGAAAAGTTGGGATCCAGATACTTCAGTTATCCTTCATTAGTTCATTTTTTTCAGTTAGCTTCATACACCCGAACTTTCAACTGCATGGAAGCTCATAAACATATAGGATACTCACCAATAGTCTCCCTTGAGGAAGGAGTCACATTAACCATAGAATCTTTCTCTCATTTATCGAAAGACTCATGTTTATCAAGATGCTGCAGCTCCACTGAACAGTCAAAAGCGGATAAGTTGCTGGGTGGAGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGAAATCGTTTACATATTTTGTTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCAAAACTTTTGCTGCTTGCCACGTTACTTTTTTATGGACAGGGTTTTCTGCCATCGAAGTTATTTGGTTTTAATATACAAAGGATAACCTTGTCTTATTTTGAGATCTCTGATGCGGTAGTGAAAGATTCAGTTATAACAACAGTATATCTTTGGAACAAGGGTTTTCAAATAATAAGAAGATTGGCCCATGGGGAAGACTGGTCTGCGTTCTTCAAGATTGCAGTTTTTCTTTACCTTCTGAAGATGTTCCTGTTAAAGTTGTTGACAAAATTGATAGGCATAGGTTTGGTATTCGCATTTATGGCATTTTTTGTTTACGAGCAATATGAATCAGAAATTGATGGAGTGGTGGATATACTTTTCACCAGTTTGAAAGAGTTCATGATATATTTGATGAGAATTTCTCCTGTTTTTATATCGAGGCTTCTGCATTATCATGACAACTTGCAGCAGTATGAAAGACCAAGAAAGGTAAAAAACATGAGATAG 1758 0.3987 MAVDDRFAHLNPKKCVVLGGRGFLGRSLVLRLLKLGNWIVRIADSPHSLQLHHSESVLSQALSSARASYFHLDLTDKCNIVKVLEGSSVVFFMDVAGIDVNDFYTCYKLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAEALILSVNDIDGLLTCSLRPSNVFGPGDTESVPYFLKLARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNHEPIQFWEFLSLLLEGLGYRRPYVKLPAKLAQYILSVLKWTHEKLGSRYFSYPSLVHFFQLASYTRTFNCMEAHKHIGYSPIVSLEEGVTLTIESFSHLSKDSCLSRCCSSTEQSKADKLLGGGKVADILLWRDEKKSFTYFVVLVLLFYWFFLSGRTFISSAAKLLLLATLLFYGQGFLPSKLFGFNIQRITLSYFEISDAVVKDSVITTVYLWNKGFQIIRRLAHGEDWSAFFKIAVFLYLLKMFLLKLLTKLIGIGLVFAFMAFFVYEQYESEIDGVVDILFTSLKEFMIYLMRISPVFISRLLHYHDNLQQYERPRKVKNMR* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00682 585 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 357 IPR036291 -
Lapu11g00682 585 Pfam Reticulon 385 541 IPR003388 -
Lapu11g00682 585 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lapu11g00682 585 FunFam Reticulon-like protein 6 360 - -
Lapu11g00682 585 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 355 - -
Lapu11g00682 585 ProSiteProfiles Reticulon domain profile. 385 582 IPR003388 -
Lapu11g00682 585 Gene3D - 6 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00682 Lapu-Chr11 9947883 9954456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00682 16 362 Lipid Metabolism Gene Families AT2G33630 29.491 1.32e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00682 K23558 - gmx:100794808 955.666