Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00680 ATGGGGTTGGAATGGGTTGGAGATTTAGCCATTAACGAGATTCTCAAGAAGTTAGAAGCAGAAGACATTGTCAGAGTTGCGTGTGTCAGCAAAAGGTTTAGGTCTTCCGCTTCCGATGACACTCTTTGGATCAATCTCTGCTTCCGTGAACTCGCTTTGACCCAACCCATCGACCATCTTGGAAACCCTCTCCCTTCCTTCAAGGAATGTTACCAAGCATGGAGAGAAGCTTTTGTTATGTATCCCTGGTCTCTTGTTAAGCGTGTAAAAAGATGCTGGGATAGAATAAAGACCTGGTTAACCATTAACTTTCCTGAAGCTGAGGCCACTCTTTGTAAAGGGGCAACTGAAGCTAACATTCAGATGTTGGAGAATTTGCTAGAGGTGGAATTGCCACTTCCTACAAGGATCCTTTATCGCTTTCATAATGGGCAAGAAATTGAGAAAGCAAATCTAGAAACTAGTACATTGGGAAGTTCTTTGGGTCTAATTGGAGGCTACTCCTTCTATAATCATTTGGTGAATGTTTATCTATTGCCTATACATCAGATAATCCAAGAAACTCAGCAAATTAGGCGTCACTTGAGCTTTTTAAGAAGATCCAAGTTTGTTCTTGTGGCTGCTTCGTCCACACTCCGTAGAAAGTTATTTTTCCTCAACTGCTCCAATGGTCAACTATATGTTGGAACCAATAAACTTCGTTCTGAAAGAAACATAATCCCTTGTGTACCTCAAGATCTGATAAGTTTACATCAGGAATCGAATGGTGAAGAGCTACAGGATGCCACGCTACTGTGGTTAGAAGAACATGGTCGCCGTCTAGAACATGGCTTCATCAAACTTTGTGACAAAGGAAATGGCAGAAGCATTAATCTTTTCCCAGAAGAGCCCCCTTTTTGTTCAACAGCTGTTACTAATGGTGTGAAGGTTCGTGCATCTGCATTGATTATCCCTGAGTTTATTGATCCTCAAGATGACAGTGAAAAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCTCGAGGATGCTTGATTAATGGAATGTCCTTCAACTCTTGTCAGCTCCATTGGAGGCACTGGATCATCCGTGCCAATGAAGTTGTTGTATCAGATTTCAATGGAGAAGCTGTTATAGGACAGTATCCACTTTTGCATCCTGGTGCACAAGAATTTGTTTATGAGAGTTGTGCACCTCTACCAACACCATCAGGTTCCATTGAAGGTTCTTTTACATTTATACCTGGCAGCTTGGCATACCCCAAAGGAGACCCTTTTCTAGCTACAGTGGCACAATTCCCGCTACAGCTCCCAGATTATATTTTCTGA 1332 0.4204 MGLEWVGDLAINEILKKLEAEDIVRVACVSKRFRSSASDDTLWINLCFRELALTQPIDHLGNPLPSFKECYQAWREAFVMYPWSLVKRVKRCWDRIKTWLTINFPEAEATLCKGATEANIQMLENLLEVELPLPTRILYRFHNGQEIEKANLETSTLGSSLGLIGGYSFYNHLVNVYLLPIHQIIQETQQIRRHLSFLRRSKFVLVAASSTLRRKLFFLNCSNGQLYVGTNKLRSERNIIPCVPQDLISLHQESNGEELQDATLLWLEEHGRRLEHGFIKLCDKGNGRSINLFPEEPPFCSTAVTNGVKVRASALIIPEFIDPQDDSEKYLFAYSIRLSLEPRGCLINGMSFNSCQLHWRHWIIRANEVVVSDFNGEAVIGQYPLLHPGAQEFVYESCAPLPTPSGSIEGSFTFIPGSLAYPKGDPFLATVAQFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00680 443 Pfam F-box-like 13 49 IPR001810 GO:0005515
Lapu11g00680 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Lapu11g00680 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Lapu11g00680 443 Pfam ApaG domain 324 415 IPR007474 -
Lapu11g00680 443 Gene3D ApaG domain 299 443 IPR036767 -
Lapu11g00680 443 SMART fbox_2 6 46 IPR001810 GO:0005515
Lapu11g00680 443 SUPERFAMILY F-box domain 12 78 IPR036047 GO:0005515
Lapu11g00680 443 Gene3D - 8 95 - -
Lapu11g00680 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Lapu11g00680 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00680 K10290 - gmx:100809876 743.036