Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00674 ATGGCAACTTCGTTATTCCGCAGCATAAGGAGAGCATCCTCCGCTCTCAGATTCTCGTACGCCACCTTGATTTCGGTCTCTTCCAGGTCAGTTGGGAGGAGCAAGATGTGTGTGTGTTCTCCTTTGAGGCACTGTGTCTCGCTAGGAGAGCAAGGTTATTGGTGGGGTTTAAGAAATTTGAGCCATGGCAGGGTGAACCTAGTGATATCGGGAGGGAAGACCAAGTTTGAGACTCATGAGGTTGAGCCTCCTAAGAAAGACAAGTGGAAGACCAAGAAGAGATTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGAAAAGCGGCCAACAGGAAAGACCCTCGTCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCAGTGCAGAAGAGAAAATTAAGTACAAGATTGAAAAGGCCAGAATTAAGGAAGCATTGCTCATTGAAAGGCTCAAAAGATACGAAGTTCCTAAACTTCAGGGTCCTGTTGTTAAGCCTGATAACTTGACGGGGGAGGAAAGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAGCCTGGTCAAGTACACGAGTATGCACAAGAACTTGCAAGATTGAGTGGCGGTATTCCACTTCAAATAATTGGAGATGACACTGTGATATTTTATCGCGGAAAGAACTACGAACAGCCTGATATTATGTCACCAATTGATACACTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTGAGGCGCTTCATAGCTATTGCTGAGAAAGAACTAGAGCTATATTACAGACACGTTGCACTTTATGGTGATCCAAACAACCGAAATCCCTTATCAGTGCTGGACAGTCCAAGTGGAAACTCAAAGGAAAAAGGGAATCATGGAATTCAAGATAAAAAAATCCCTGACTTGAACAGTGATTATTTTTCAGCCGGTCTTTCAGAGACTGAAGCAGATTCCACGGAAATGGAGCTGTCAGAAACAGAAGATAGTTTTGAAGATGAAAGCTTGTTAATGAATGAATCAGATTCTGAAGAGGACAGCATGTTGGATTCCAATGGTGATAAAGAAAAGGAGGTATATTTTACTAAAATGCAACATGAAAGTGTAAGCTCGACCAAAGGTTCTACATCAATGGCTAAACGTAGCCACTATCATGATAATAATAATAATCAATGTTTATAA 1308 0.4144 MATSLFRSIRRASSALRFSYATLISVSSRSVGRSKMCVCSPLRHCVSLGEQGYWWGLRNLSHGRVNLVISGGKTKFETHEVEPPKKDKWKTKKRLKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFASAEEKIKYKIEKARIKEALLIERLKRYEVPKLQGPVVKPDNLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTVIFYRGKNYEQPDIMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNNRNPLSVLDSPSGNSKEKGNHGIQDKKIPDLNSDYFSAGLSETEADSTEMELSETEDSFEDESLLMNESDSEEDSMLDSNGDKEKEVYFTKMQHESVSSTKGSTSMAKRSHYHDNNNNQCL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00674 435 MobiDBLite consensus disorder prediction 79 126 - -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 317 332 - -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 390 405 - -
Lapu11g00674 435 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Lapu11g00674 435 Coils Coil 92 112 - -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 314 435 - -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 406 435 - -
Lapu11g00674 435 SUPERFAMILY YhbY-like 170 264 IPR035920 -
Lapu11g00674 435 Gene3D - 170 271 IPR035920 -
Lapu11g00674 435 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 21 426 IPR040286 -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 361 389 - -
Lapu11g00674 435 MobiDBLite consensus disorder prediction 89 106 - -
Lapu11g00674 435 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Lapu11g00674 435 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00674 Lapu-Chr11 9884252 9888166 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00674 - - vun:114168415 700.279