Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00659 ATGGATCCACTAACAAGAGGAGAATACCCCAAAAGCATGTTTTCCTTGGTGAAATCACGATTACCTAAGTTTACAAAGGAGCAATCCAGATTGCTTATTAATTCATTTGATTTTATTGGCATAAACTACTACACCTCTCGTTATGTCTCTGATGCACCTGAATTAAGAAATGTCAGAGGCAGTTACCTAACAGATGCCCTTGCAAATTTTTCATTGGTGCGTAATGGAAAACCTATTGGTCTAAATGTTGCTTCAGATTGGTTGTATGTTTATCCAAGAGGATTTCGAGACCTCTTGTTATACACTAAAGATAAATACAACAATCCTTTAATTTATATTACTGAAAATGGTATAAATGATTATGATGATCCATCACTCTCACTTCAAGAATCTCTCTTAGATATATATAGAATTGATTATCACTATCGTCATCTATATTATCTTCAAGAAGCAATTAAGAATGGTGTAAATGTAAAAGGCTATTTCGTATGGTCACTCTTGGACAATTTTGAATGGCACTTAGGTTACACGATGCGATTTGGAATGAATTTTGTAGATTACAGAAATGGTTTGAAAAGATACCCAAAACTTTCTGCTGTATGGTTCAAGGATTTTCTCAACACAGAATTCAAACTTCAAAATTCCCTGTAA 651 0.3364 MDPLTRGEYPKSMFSLVKSRLPKFTKEQSRLLINSFDFIGINYYTSRYVSDAPELRNVRGSYLTDALANFSLVRNGKPIGLNVASDWLYVYPRGFRDLLLYTKDKYNNPLIYITENGINDYDDPSLSLQESLLDIYRIDYHYRHLYYLQEAIKNGVNVKGYFVWSLLDNFEWHLGYTMRFGMNFVDYRNGLKRYPKLSAVWFKDFLNTEFKLQNSL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00659 216 PRINTS Glycosyl hydrolase family 1 signature 35 49 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 PRINTS Glycosyl hydrolase family 1 signature 111 119 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 PRINTS Glycosyl hydrolase family 1 signature 155 172 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 PRINTS Glycosyl hydrolase family 1 signature 179 191 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 PRINTS Glycosyl hydrolase family 1 signature 134 145 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 PANTHER GLYCOSYL HYDROLASE 1 209 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 ProSitePatterns Glycosyl hydrolases family 1 active site. 111 119 IPR018120 -
Lapu11g00659 216 Gene3D Glycosidases 1 208 - -
Lapu11g00659 216 Pfam Glycosyl hydrolase family 1 2 208 IPR001360 GO:0004553|GO:0005975
Lapu11g00659 216 SUPERFAMILY (Trans)glycosidases 1 207 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00659 Lapu-Chr11 9746407 9747542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00659 2 213 Glycoside Hydrolase AT2G44480 49.057 1.11e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00659 K01188 - gmx:100820528 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00659 11 9746407 9747542 Lapu11g00659 11 9746407 9747542 ECH