Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00655 ATGATGAAGGATATGAATTTGGATTCGTATAGATTTTCCATATCTTGGTCAAGGATTCTACCAAAAGGAAAGCTAAGTGGAGGTATAAATAAAGAAGGAATAAACTATTACAACAATCTTATCAATGAGCTCCTGTCTAATGGTATAAAACCATTTGTGACAGTTTTCCATTGGGATCTTCCCCAAGCACTAGATGATGAATATGGTGGCTTTTTAAGTCCACTCATTGTGAAAGATTTTCGGGACTATGCAGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGATTACATTGAACGAGCCATGGAGTTACACCCTACATGGCTATGCAAATGGACGATTGGCACCGGGTCGTTGTTCTGCTTGGATGAATTTAAATTGCACTGGTGGTGATTCTGCAACCGAGCCATATTTGGTTGCTCATCACCAACTTCTTGCTCATGCAGAAGCTGTTAGTGTCTACAAGACCAAGTATCAGACCTCTCAGAAAGGTACGATAGGCATAACACATGTAGTTAGTTGGGTATTGCCGCTCAGAGATGGAGAACTTGATCAAAAGGCTACTGAAAGATCACTTGATTTCATGTATGGATGGTTTATGGATCCACTAACATCTGGAGATTATCCAAAAAGCATGCGATCCCTTGTGGGAGCAAGATTACCAAACTTTACTGCTGAGGAAGCCAAACTACTTGTTGGTTCGTTTGATTTTATTGGTCTAAATTATTACTCTACCTCGTATGCCTCTGATGCACCTGATCTAAAAAAGGCCAGACCTAGCTACGTAACAGATTCTCTTGTACTTCCTGCCTTTGAACGTGATGGGAAGCCTATTGGAATAAAGATTGCTTCGGATTGGTTATATGTTTGTCCCAGAGGAATTCAAGATCTTTTATTATATACCAAGGAAAAGTACAATAATCCTTTGATTTACATCACAGAGAATGGTATAAACGAGTACGATGATCCAACATTATCAGTCAAAGAATCTCTTCTGGATATCTTTAGAATTGATTATCATTATCGCCATCTCTTTTATCTTGAATCTGCAATTAGGAATGGAGCAAATGTAAAAGGATATTTCATGTGGTCTTTGATCGACAATTTTGAGTGGTATTCAGGATATACATCACGATTTGGAATGATCTTCGTGGATCACAAAAATAAATTGAAGAGACACCAAAAACTCTCTGCACTATGGTTCAAGAATTTTCTCAAAAAAGGAAACTAG 1239 0.381 MMKDMNLDSYRFSISWSRILPKGKLSGGINKEGINYYNNLINELLSNGIKPFVTVFHWDLPQALDDEYGGFLSPLIVKDFRDYAELCFKEFGDRVKYWITLNEPWSYTLHGYANGRLAPGRCSAWMNLNCTGGDSATEPYLVAHHQLLAHAEAVSVYKTKYQTSQKGTIGITHVVSWVLPLRDGELDQKATERSLDFMYGWFMDPLTSGDYPKSMRSLVGARLPNFTAEEAKLLVGSFDFIGLNYYSTSYASDAPDLKKARPSYVTDSLVLPAFERDGKPIGIKIASDWLYVCPRGIQDLLLYTKEKYNNPLIYITENGINEYDDPTLSVKESLLDIFRIDYHYRHLFYLESAIRNGANVKGYFMWSLIDNFEWYSGYTSRFGMIFVDHKNKLKRHQKLSALWFKNFLKKGN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00655 412 FunFam Beta-glucosidase 12 1 410 - -
Lapu11g00655 412 ProSitePatterns Glycosyl hydrolases family 1 active site. 313 321 IPR018120 -
Lapu11g00655 412 Gene3D Glycosidases 1 410 - -
Lapu11g00655 412 PRINTS Glycosyl hydrolase family 1 signature 336 347 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 PRINTS Glycosyl hydrolase family 1 signature 313 321 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 PRINTS Glycosyl hydrolase family 1 signature 357 374 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 PRINTS Glycosyl hydrolase family 1 signature 237 251 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 PRINTS Glycosyl hydrolase family 1 signature 381 393 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 Pfam Glycosyl hydrolase family 1 1 410 IPR001360 GO:0004553|GO:0005975
Lapu11g00655 412 SUPERFAMILY (Trans)glycosidases 1 409 IPR017853 -
Lapu11g00655 412 PANTHER GLYCOSYL HYDROLASE 1 410 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00655 Lapu-Chr11 9706724 9721997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00655 1 410 Glycoside Hydrolase AT5G44640 53.041 2.44e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00655 K01188 - gmx:100776708 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00655 11 9706724 9721997 Lapu11g00655 11 9706724 9721997 ECH