Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00653 ATGATAAATATAACAAGACTGGAGAAAATGAATTATATAAAGGTGGTGCCAATCATTCCAAGGCAGTTCCACCCATTCTTGACCTTTCTTATCTCAACCGGAGCAGTTTCCCCAAAGCCTTTGTTTTCAGGACTGCATCAGCTTCATACCAGTATGAAGGTGCTGCAAGGGAAGATGGAAAAGGACCGAGTATATGGGAATACTTTCACTCACAAATATCCAGGAAAAATAAAAGACCGAAGTACTGGAAACGTAACCACAGACCAATATCATCGCTATAAGGAGGATATTGGAATCATGAAGGACATGAATTTGGATGCTTACAGATTCTCCATTTCTTGGCCTAGGGTATTACCGAAAGGAAAGCTTTGTGCAGGAGTAAACAAGACAGGAATAAAACTACTACAACAACCTGGTCAACGAGTTACTGGAGAATGGTGTGCGTAA 447 0.4072 MINITRLEKMNYIKVVPIIPRQFHPFLTFLISTGAVSPKPLFSGLHQLHTSMKVLQGKMEKDRVYGNTFTHKYPGKIKDRSTGNVTTDQYHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLCAGVNKTGIKLLQQPGQRVTGEWCA* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00653 148 PANTHER GLYCOSYL HYDROLASE 55 133 IPR001360 GO:0004553|GO:0005975
Lapu11g00653 148 SUPERFAMILY (Trans)glycosidases 57 134 IPR017853 -
Lapu11g00653 148 Gene3D Glycosidases 51 137 - -
Lapu11g00653 148 Pfam Glycosyl hydrolase family 1 64 134 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00653 Lapu-Chr11 9693398 9711267 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00653 67 132 Glycoside Hydrolase AT2G25630 54.545 9.84e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00653 K01188 - vum:124848827 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00653 11 9693398 9711267 Lapu11g00653 11 9693398 9711267 ECH