Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00651 ATGGCAATCAGGGATGGTGTGAACGTGAAAGGATATTTTGTATGGTCATTTCTGGATAACATGGAGTGGGCCTCTGGCTATACTGTGCCATTTGGATTCATCTTTGTGGATTTCAAAAACGGTTTGAAAAGATATCCAAAACTCTCAGCGCAATGGTTCAAGAACTTTCTCAGCAAAACATTAAACGCACACACACAGACTTCACTGAACATGAACAAGGATATGGTATTCAACTGTTATCAGTGTCTTCTCCTTGTTGGAGTCTTCACTCTCCTTGTGAGCTTCTCCGTTACAATCACACAAGCTGTTGCACCTATTCTTCATGTTTCTTCCCTTAATCGAACCAGTTTTCCCCCATCTTTCATCTTTGGCACTGCCTCCTCAGCCTACCAGTACGAAGGTGCAGCAAAGGAAGGAGGTAGAGGACCAAGTACATGGGATACCTTTTCTCATAAATATCCAGAAAAGATATCGGATAGAAGCAACGGAGATGTAGCGGTTGATCAGTACCATCGTTATAAGGAAGATGTTGGGATCATGAAGTATATGAACACTGATGCTTACAGATTCTCCATCTCGTGGCCAAGGATATTGCCGAAAGGAAAAATTAGTGCTGGTATAAACCAAGAAGGAATCAAATATTACAACAATCTCATCAACGAACTACTGGCAAATGATCTTCTGCCATTTGTGACCCTTTTCCATTGGGATCTTCCCCAAGCCTTAGAAGATGAATACGGTGGCTTCTTAAGCCCTCATATTATAAATGATTTCCAAGACTACGCAGAGCTATGCTTCAAGGAATTTGGAGATAGAGTGAGACATTGGATTACTTTTAATGAGCCCTGGAGTTACAGTATGGGCTCAGAGCCCTACATGAGCTCACACTACCAACTGCTTGCTCATGCAGCAGCTGTCAAAATTTATAAAACCAATTATCAGGCACTTCAAAATGGTTTGATAGGCATCTCCTTAAATTGTCACTGGTTTATTCCGTTCTCAAATGACACATTAGATCATCAAGCTGCCCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGCAACCACTTACAAGAGGAAAATATCCAAAAACCATGCAATCTTTGCTTGGAAGCCGATTACCAAACTTCACTGAAGAGCAATCCAAGCTACTAATCGGCTCGTTTGATTTTATTGGACTCAATTACTACACCACTAATTATGCTGCCCACATATCCCGTCCAATTAATAACACAAGCAATAGTAGCTATTTCCAGGACACTCATGTCAATTTTACAACCGAACGTAACGGGTCACCCATTGGACCAAGGGCTGCTTCATCTTGGCTTTATGTTTATCCAAGGGGACTTAGAGAACTATTGTTGTACATCAAGATAAAGTATAAAAACCCTGTAATCTACATAACAGAAAATGGTATGGACGAGTCCAATGATCCAACTCTATCACTTGAAGAGGCACTCATGGATACTTATAGAATTGACTACTACTATCGCCATCTCTATTATATTTCTGTTGCAATCAAGGATAGGGTGAAAGTACACGGATACTTTGCATGGTCGCTTCTGGACAACTTCGAATGGGGTTCTGGCTACACCTTGCGTTTTGGAATTAACTTCGTCGATTACAAGGATAATTTGAAAAGACACCAAAAGCTCTCTGCTCATTGGTTCAGGAATTTTCTTCAAAAACAATAG 1698 0.4064 MAIRDGVNVKGYFVWSFLDNMEWASGYTVPFGFIFVDFKNGLKRYPKLSAQWFKNFLSKTLNAHTQTSLNMNKDMVFNCYQCLLLVGVFTLLVSFSVTITQAVAPILHVSSLNRTSFPPSFIFGTASSAYQYEGAAKEGGRGPSTWDTFSHKYPEKISDRSNGDVAVDQYHRYKEDVGIMKYMNTDAYRFSISWPRILPKGKISAGINQEGIKYYNNLINELLANDLLPFVTLFHWDLPQALEDEYGGFLSPHIINDFQDYAELCFKEFGDRVRHWITFNEPWSYSMGSEPYMSSHYQLLAHAAAVKIYKTNYQALQNGLIGISLNCHWFIPFSNDTLDHQAAQRALDFMFGWFMQPLTRGKYPKTMQSLLGSRLPNFTEEQSKLLIGSFDFIGLNYYTTNYAAHISRPINNTSNSSYFQDTHVNFTTERNGSPIGPRAASSWLYVYPRGLRELLLYIKIKYKNPVIYITENGMDESNDPTLSLEEALMDTYRIDYYYRHLYYISVAIKDRVKVHGYFAWSLLDNFEWGSGYTLRFGINFVDYKDNLKRHQKLSAHWFRNFLQKQ* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00651 565 Pfam Glycosyl hydrolase family 1 2 59 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 Pfam Glycosyl hydrolase family 1 115 564 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 PRINTS Glycosyl hydrolase family 1 signature 511 528 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 PRINTS Glycosyl hydrolase family 1 signature 467 475 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 PRINTS Glycosyl hydrolase family 1 signature 389 403 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 PRINTS Glycosyl hydrolase family 1 signature 535 547 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 PRINTS Glycosyl hydrolase family 1 signature 490 501 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 FunFam Beta-glucosidase 12 288 564 - -
Lapu11g00651 565 FunFam Beta-glucosidase 12 103 287 - -
Lapu11g00651 565 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 121 135 IPR033132 -
Lapu11g00651 565 Gene3D Glycosidases 1 71 - -
Lapu11g00651 565 SUPERFAMILY (Trans)glycosidases 104 563 IPR017853 -
Lapu11g00651 565 PANTHER GLYCOSYL HYDROLASE 2 61 IPR001360 GO:0004553|GO:0005975
Lapu11g00651 565 SUPERFAMILY (Trans)glycosidases 2 59 IPR017853 -
Lapu11g00651 565 Gene3D Glycosidases 97 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00651 Lapu-Chr11 9693398 9711267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00651 2 59 Glycoside Hydrolase AT5G44640 62.069 6.20e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00651 K01188 - vum:124848827 1055.43