Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00650 ATGATAAAGCCTCAACTGTATCAATCACAAAAACCTAACCAAACCCTCTTCTTTCTGCAACGCCCATTCGTTCACTTCATTGGAAGCTGCAGAAGCAGAAATGCATCTCTTTCGCCATGGTTAGGGCACAAAGTGCACACCCAAAAACAGCTTCTACTGGTTTCACGCAACGTCGAAGCTCATTCTAGTACTCCTGCAACAACAACAACGACTACTTCAGACTCAGATGAGAGGAGTAGAGTGAAGGTTAAAGCCATAGTTAAGGTCAAAATAACTGCGGCTGGTTTCTTCTCCAGTCTCAGGTTAGACCGAGGAATTGACGATATAACAGATTTGCTTGGTAAATCTCTTCTCTTGGAGCTTGTTAGCTCTGAGCTTGATCCTGTGACTGGAGTAGAGAAGGAAACGCTGAAAGCATATGCACACAAAGCTGGAAATGGCGAGGAGTCGTATAAGTACGAAGCTGAATTTGATGTTCCAAATGATTTTGGAGAGATTGGTGCTGTTCTGGTCGAGAATGAGCATCACAAAGAGATGTTCCTTGAAACCATCATCCTCCATGGCTTCCCCCAACACCCTCCTATTCATTTTCACTGTGCCTCTTGGGTTCACTCCAAGTTCGATAATCCCATCAACAGGGTCTTCTTTTCCAACAAGTGTTATTTACCGGGAGAGACACCGAGTGGTTTAAGAAGACTAAGAGCAGAAGAATTGAGTAACCTGCGTGGAAATGGAGAAGGAGAGCGGAAAAGTTTTGAAAGAATATACGATTACGATATCTATAATGACATTGGAGATCCTGATAAAAGCCTTGAACTTCAGAGACCACCTTTGGGAGGAAAAGAACGACCGTATCCTAGACGTTGTCGAACTGGTCGGCCACATAGTGAAGCAGATCCGTTGTCAGAAAAAAAAAGTGGGAAGTTTTACGTTCCAAGGGACGAGTGCTTCTCAGAGGTGAAGCAGCTAACTTTCTCAACCAAGACCTTACACTCAGTGTTGCTGATATTGCTTCCATCTCTGGGGAAAATTATCAAAGAAAAGGACCTTGCGTTTGCGTACTTCGAAGACATAGATTCGCTCTTCAGCCATGGACTTGACTTACCTCCTGAGCAGGATACCGAGAAGGGGTTCCTAGGAAAAATCATGCCCAGACTTGTCAAATCAATTTCTGGCGAAAGGGGACACGTGCTTCGCTTTGAGACCCCAGAGGCTATGAGCAGGGACAGGTTTTTCTGGTTCAGAGATGAGGAATTTGCTAGACAAACTGTTGCTGGTCTCAACCCGTATAGCATAAGATTGGTCACAGAATGGCCATTGAGGAGTAAACTTGACCCAGAAATATATGGTCCAGCAGCATCAGCAATCACTTCAGAAATTATCAATAAAGAAATTGGTGGCATAATGACTGTACAACAGGCGATCGCAGAAAAGAAGCTATTCATGTTGGATTACCATGACATACTTTTACCGTATGTCAGCAAAGTACGCAAACTGAAGGGGAAAACACTGTATGGATCACGAACTTTGTTCTTTCTAAACCCAGAGGGGACACTGAGGCCTCTAGCCATTGAGCTTACTCGGCCACAGACAAAGGGACAAAGCCAATGGAAGCAAGTTTTCACGCCTTCTTGGCACTCAACCAGTGTTTGGCTCTGGAGGTTTGCCAAGGCTCATGTTCTTGCACATGACTCTGGCTATCACCAACTTGTTAGTCATTGGTTGAGAACTCACTGTGTGACAGAGCCCTATGTTATTGCAACCAACAGGCAACTAAGTGAGATGCATCCCATATATAGATTGCTACATCCTCATTTCCGTTACACCATAGAGATTAACGCTCTTGCACGGGAAGCACTAATAAACGCTGAGGGCACAATTGAGAGCTCATTCGCACCAGGAAAGTACTCCATTGAGATTAGTTCCGCTGCTTATGCTCTCGAATGGCGGTTTGATGAGCAGGGTCTACCTGCTGATCTAATTAGAAGGGGAATGGCTGTGGAAGATCCATTTTCTCCACATGGCTTAAAACTTACCATTAAAGACTATCCTTTTGCCAATGATGGGCTGCTACTGTGGGACGCTATAAAGCTATGGGTGACTGACTATGTCAACCATTACTACCCTGAACGAAGTCTTGTGCAGTCAGATGAAGAGCTGCAGGCATGGTGGACAGAGATTAGAATATCTGGTCATGCTGACAAAAAAGATGAGCCGTGGTGGCCAGTTCTCAAAACCCCAAAAGACCTCATTGGAATCCTCAGCACAATCATATGGGTAACTTCTGGTCACCATGCAGCTGTGAACTTTGGGCAATATGTTTATGGGGGATATTTCCCAAATAGGCCTACAATTGCCAGAACTAAAATGCCCACAGAGGACCCTACAGAAGAAGAGTGGAAAAAGTTCATTGCAAAACCCGAAAAAGCACTTCTCAAGTGCTTCCCTTCACAACTCCAAGCAACTAGAGTCATGGCTGTCTTGGATATACTTTCAACTCATTCACCTGATGAGGAATACATAGGAGAAAAGATGGAACCATCATGGGGTGAAGACCCCGTCATAAAGGATGCCTTTGAAAGATTTAGAGAAAGACTGAAGAAACTAGAATCACTGATTGATGATAGGAATGAAAATACAAAATTGAAGAACAGAAATGGAGCTGGTGTTGTCCCATACGAGCTGTTGAAACCTTTCTCAAAGCCAGGTGTGACTGGAATGGGGGTTCCCTGCAGTATATCTATTTAA 2748 0.4421 MIKPQLYQSQKPNQTLFFLQRPFVHFIGSCRSRNASLSPWLGHKVHTQKQLLLVSRNVEAHSSTPATTTTTTSDSDERSRVKVKAIVKVKITAAGFFSSLRLDRGIDDITDLLGKSLLLELVSSELDPVTGVEKETLKAYAHKAGNGEESYKYEAEFDVPNDFGEIGAVLVENEHHKEMFLETIILHGFPQHPPIHFHCASWVHSKFDNPINRVFFSNKCYLPGETPSGLRRLRAEELSNLRGNGEGERKSFERIYDYDIYNDIGDPDKSLELQRPPLGGKERPYPRRCRTGRPHSEADPLSEKKSGKFYVPRDECFSEVKQLTFSTKTLHSVLLILLPSLGKIIKEKDLAFAYFEDIDSLFSHGLDLPPEQDTEKGFLGKIMPRLVKSISGERGHVLRFETPEAMSRDRFFWFRDEEFARQTVAGLNPYSIRLVTEWPLRSKLDPEIYGPAASAITSEIINKEIGGIMTVQQAIAEKKLFMLDYHDILLPYVSKVRKLKGKTLYGSRTLFFLNPEGTLRPLAIELTRPQTKGQSQWKQVFTPSWHSTSVWLWRFAKAHVLAHDSGYHQLVSHWLRTHCVTEPYVIATNRQLSEMHPIYRLLHPHFRYTIEINALAREALINAEGTIESSFAPGKYSIEISSAAYALEWRFDEQGLPADLIRRGMAVEDPFSPHGLKLTIKDYPFANDGLLLWDAIKLWVTDYVNHYYPERSLVQSDEELQAWWTEIRISGHADKKDEPWWPVLKTPKDLIGILSTIIWVTSGHHAAVNFGQYVYGGYFPNRPTIARTKMPTEDPTEEEWKKFIAKPEKALLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIKDAFERFRERLKKLESLIDDRNENTKLKNRNGAGVVPYELLKPFSKPGVTGMGVPCSISI* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00650 915 SMART LH2_4 85 218 IPR001024 GO:0005515
Lapu11g00650 915 Gene3D - 321 410 IPR027433 -
Lapu11g00650 915 MobiDBLite consensus disorder prediction 281 304 - -
Lapu11g00650 915 Gene3D - 222 320 - -
Lapu11g00650 915 Gene3D PLAT/LH2 domain 63 221 - -
Lapu11g00650 915 PANTHER LIPOXYGENASE 82 915 IPR000907 GO:0016702|GO:0034440|GO:0046872
Lapu11g00650 915 MobiDBLite consensus disorder prediction 267 304 - -
Lapu11g00650 915 Coils Coil 859 879 - -
Lapu11g00650 915 Pfam PLAT/LH2 domain 152 216 IPR001024 GO:0005515
Lapu11g00650 915 ProSitePatterns Lipoxygenases iron-binding region signature 1. 568 582 IPR020833 GO:0016702|GO:0046872
Lapu11g00650 915 Gene3D - 412 545 - -
Lapu11g00650 915 Gene3D - 547 914 - -
Lapu11g00650 915 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 220 915 IPR013819 GO:0016702|GO:0046872
Lapu11g00650 915 FunFam Lipoxygenase 547 914 - -
Lapu11g00650 915 SUPERFAMILY Lipoxigenase 222 915 IPR036226 -
Lapu11g00650 915 FunFam Lipoxygenase 430 564 - -
Lapu11g00650 915 ProSitePatterns Lipoxygenases iron-binding region signature 2. 595 605 IPR020834 GO:0016702|GO:0046872
Lapu11g00650 915 PRINTS Lipoxygenase signature 588 608 IPR013819 GO:0016702|GO:0046872
Lapu11g00650 915 PRINTS Lipoxygenase signature 550 567 IPR013819 GO:0016702|GO:0046872
Lapu11g00650 915 PRINTS Lipoxygenase signature 568 585 IPR013819 GO:0016702|GO:0046872
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 398 414 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 349 370 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 437 456 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 505 529 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 284 303 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 828 842 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 213 234 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 187 205 IPR001246 GO:0016491
Lapu11g00650 915 PRINTS Plant lipoxygenase signature 252 268 IPR001246 GO:0016491
Lapu11g00650 915 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 82 221 IPR036392 GO:0005515
Lapu11g00650 915 ProSiteProfiles PLAT domain profile. 96 217 IPR001024 GO:0005515
Lapu11g00650 915 Pfam Lipoxygenase 229 898 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00650 Lapu-Chr11 9686506 9693591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00650 159 915 Acyl Lipid Metabolism Gene Families AT3G45140 59.658 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00650 K00454 - gmx:100797626 1582.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00650 11 9686506 9693591 Lapu11g00650 11 9686506 9693591 ECH