Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00644 ATGGAGAAATACTTGGTATCGCATAAACCCTCGATTGAAGAACTTCGGCCTCTTCCAAGGACGCAATGGAAGAGGATTTCGGTTGAACTAAATGGGAGATTCGAGCATAACTACCGTCATGAGATGCTGGGTCTGTTAATTCGATCGTATTCTGAGGTTGGAGTGTTTCCGCATCTCTATCAAGTGGACGGTTTGCCATGCCACTCTCACACAAATCGATTGGTTGGTGAGGCAAATGGTGATGGCCATCTTCCATTTAGAAAGCAAGGCATCTCTGCAGTAGATTTTGATAACAAGGGAATATACTTGGTGTCAGTGACAAAATCGGGTTGCTTAACAGTTCACGACTTCGAAACTCTTTATTGCCAGATACCTGAGTTAACTTGCTTGCGAGAAGATGAAAGCAAGCATTTAATGCACCTCTCACTAAATCGACAACTTGATGCTGTCAGATGGAATCCTCTTAATCAGGATGAGGTTGTTTGTGCATCTGTCAAAAGTAATGAACTACTCATATTCGATATTGGATATGTCTCATCGGATCCAGTTGAAGTGTTAAGAACAAGACGTACAGCCACAGTTAATGGATCCACCATACACAAAGGTCTCTCTGATGTTGCTTTTACGTCAAATGACACGAGGATACTTGCTTCCGATACACATGGTGCAATTAATGTCTGGGATAGAAGAGTGAACTCTCTACCTTGCCTTGAGCTTGCATCTGCTTCATGTGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTTTGGTGCTGGAAATCATGGGCTCGTGCATATATGGGATATTCGTGGTGGAAGAGCATCTGCCACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCAGTAAAATCAGTGAAGTTGGCAACATTGCTGGAGAAGATTGGATCTTTGAAGGCACAAGCAAATATTGTTCCCAAGGAGATTCACTCGATTGATATTAATCCATCGTGCCCACATCAGTTAGCATTCCATCTTGTCGATGGCTGGTCAGGCGTTTTGGATATTAATAATTTTCAAGTTACACATATTCATTGCCCACCCCCAGCTTGGTTAAACGACTCCTATATTCCTGCTGATCTATCATACTTACGAAAACCTTCATGGTTATCAACGTATTCGATCTATATGACCGGGTCATCATCAGATTGTGGTATCCATCTCTTGGATTTTTATCCCAGCACCAACTCACCATGCCATGTGGATTACAAGGAGGATTTGCAAGAAATTTCAAGGCGGAAAAACCGAAGTAATCAGAACAGATTTATTTCTTTATCTGAAGGAGTTATCTCATGTGTTGCTCACCCTCTGTATAATGCCATCGTAGCAGGAACCAAGGTTTGTGAATTAGCAAATTCAGTTATCGCCATTCTCTGTTTGAGATTATGTTTT 1422 0.4142 MEKYLVSHKPSIEELRPLPRTQWKRISVELNGRFEHNYRHEMLGLLIRSYSEVGVFPHLYQVDGLPCHSHTNRLVGEANGDGHLPFRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFETLYCQIPELTCLREDESKHLMHLSLNRQLDAVRWNPLNQDEVVCASVKSNELLIFDIGYVSSDPVEVLRTRRTATVNGSTIHKGLSDVAFTSNDTRILASDTHGAINVWDRRVNSLPCLELASASCGTLNSIQLNADNQIIFGAGNHGLVHIWDIRGGRASATFQSLKEICHPPVKSVKLATLLEKIGSLKAQANIVPKEIHSIDINPSCPHQLAFHLVDGWSGVLDINNFQVTHIHCPPPAWLNDSYIPADLSYLRKPSWLSTYSIYMTGSSSDCGIHLLDFYPSTNSPCHVDYKEDLQEISRRKNRSNQNRFISLSEGVISCVAHPLYNAIVAGTKVCELANSVIAILCLRLCF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00644 474 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Lapu11g00644 474 Gene3D - 48 356 IPR015943 GO:0005515
Lapu11g00644 474 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 87 426 - -
Lapu11g00644 474 SUPERFAMILY WD40 repeat-like 86 400 IPR036322 GO:0005515
Lapu11g00644 474 Coils Coil 410 430 - -
Lapu11g00644 474 SMART WD40_4 233 272 IPR001680 GO:0005515
Lapu11g00644 474 SMART WD40_4 187 228 IPR001680 GO:0005515
Lapu11g00644 474 SMART WD40_4 71 116 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00644 Lapu-Chr11 9615216 9626713 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00644 - - gmx:100780441 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00644 11 9615216 9626713 Lapu11g00644 11 9615216 9626713 ECH