Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00640 ATGAAGGCTTTTGTGTCTGTGTTTGTCGTCCTTGTGTTGTGTGGTTATGCTGTTGCTAAAGAATGCACAAACATTCCTACGCAATCACATACCTTCATGTATGGCCTATTGTCATCCAAGAATGAAACGTGGAAGAATGAGGTGATGTCTCACTACCATTTGACGCCAACGGATGAATCTGCGTGGGCTGATTTGCTGCCGAGGAAGTTCTTGTCAGAACAACAACAACATGATTGGGGGGTTATGTATAAGAAAATTAAGAACATGGGTGTGTTCGAGCCACCTGAAGGTTTTCTAAACGAAGTGCCTCTTGAGGATGTGTGGTTGCATGAGGGTTCCATCCATGGCATAGCACAACAAACAAACTTGGAGTATCTGTTGATGTTTGATGTGGACAGGTTGATTTGGAGCTTCAGGAAGACTGCTGGTTTACCTACTCCTGGTACCCCTTATGGAGGGTGGGAAGATCCAACAAGCGAGCTTCGGGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACAAAAAATCTTAGCCTGAACCAGAAAATGACATCTCTTGTTGATGGTCTGTCTGCCTGTCAGGAGAAAATTGGAAATGGATATCTATCTGCATTTCCGTCTGAGTTTTTTGATAGATTTGAAGCTGTTAAACCTGTTTGGGCTCCATATTATACCATTCACAAGATTCTGGCTGGTCTCTTGGATCAACATACATTTGCTGGAAATTCTCAAGCTCTAAAAGTGGTTACATGGATGGTTGACTACTTCTACAACAGAGTGCAGAATGTAATAACAATGTACACTATAAATAGACATTATCAATCACTGAACCAGGAAACTGGAGGAATGAACGATGTCCTTTACAGATTATACAGCATAACAGGAGATTCTAAGCATCTATTGTTGGCTCACCTTTTTGACAAGCCGTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAACGACATAGCTGACTTGCATGCTAATACACATATCCCAATTGTTGTTGGAACTCAAAGGCGATATGAAATCACAGGCGATCCACTTTATAAGGATATTGGGACATTCTTTATGGAAACCATAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCTGTCAGCGAGTTCTGGAGAGATCCTAAGAGAATCGCAGATAACTTGAAAACAACAGAGAATGAAGAATCATGCACAACTTATAATATGTTAAAGGTTTCACGCCACCTGTTTAGATGGACCAAAGAAGTTTCTTATGCAGACTATTATGAGCGTGCCTTAACCAATGGAGTACTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGGTTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTCAAACTTTTCATAGTTGGGGAACACCTTTTGACACTTTCTGGTGCTGCTATGGAACGGGAATTGAATCATTCTCAAAGTTGGGGGATTCTATATATTTCGAAGAAGAAGGGAAAAATCCTACACTTTACGTGATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGAAAAATTTCGCTCTTTCAGACAGTTGTTCCAGCTTCTTCATGGGATCCTTACTTACGAGTGAATTTTACGTTTTCTCCAGTTGAGAATACTTGGAGTACATTGAACTTTCGACTGCCTACTTGGACTCGTCTGGATGGTGCCAAAGCGATATTAAATGGTGAAACTTTGTCTCTTCCAACTCCAGGAAATTTTTTGACAATGACAAGGAAGTGGAGTGCTAGTGACTGCCTGACTCTTCAGTTGCCCCTTACCTCAAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTATTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCCGGTCATACCCTCGGTGGTGATTGGGACCTTAAATATGGGGCTAATAGTTCAGACTGGATTACTCCAATTCCTGCCAGTTACAATAGTCAACTAGTTTCTTTTTCCCAATACTTTGAAAATTCAACTTTTGTTTTAGTAAATTCAAACCAATCACTTGGAATGCAAAAGTTACCTGAATCTGGAACTGATTTGGCTCTTCAGGCAACCTTTAGGCTTGTCCTAAATGAATCTTCCTCAAACTTTTCAACATTGGCTGATGGTAAGAATAGATCAGTGATGTTAGAACCATTTGATTTTCCTGGAATGAATGTCATTCAACAAGGAGCAGACAAACCTCTTCTCATTGTAGATTCTTCCAATGGGGAGCCATCTTCTGTTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCAGAGAGCTCCCAGGGTTGTTATGTGTACAGTGGTTTGAGCTCTAGTGCAGGAATCAAGCTCAGTTGCAAATCTGATTCTGATGCTACTTTTAACCAATCAACAAGCTTTGTTTCTCAAAAAGGATTGAGCCAATACAATCCTGTGAGTTTTGTGGCTAAAGGCGCAAACAGGAACTTTCTTTTGGAACCATTATTCTCATTCAGAGATGAGCATTACACTGTTTATTTCAACATTACGGGTTGA 2559 0.4088 MKAFVSVFVVLVLCGYAVAKECTNIPTQSHTFMYGLLSSKNETWKNEVMSHYHLTPTDESAWADLLPRKFLSEQQQHDWGVMYKKIKNMGVFEPPEGFLNEVPLEDVWLHEGSIHGIAQQTNLEYLLMFDVDRLIWSFRKTAGLPTPGTPYGGWEDPTSELRGHFVGHYLSASALMWASTKNLSLNQKMTSLVDGLSACQEKIGNGYLSAFPSEFFDRFEAVKPVWAPYYTIHKILAGLLDQHTFAGNSQALKVVTWMVDYFYNRVQNVITMYTINRHYQSLNQETGGMNDVLYRLYSITGDSKHLLLAHLFDKPCFLGLLAVQANDIADLHANTHIPIVVGTQRRYEITGDPLYKDIGTFFMETINSSHSYATGGTSVSEFWRDPKRIADNLKTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMVYMLPLGLGVSKAQTFHSWGTPFDTFWCCYGTGIESFSKLGDSIYFEEEGKNPTLYVIQYISSSFNWKSGKISLFQTVVPASSWDPYLRVNFTFSPVENTWSTLNFRLPTWTRLDGAKAILNGETLSLPTPGNFLTMTRKWSASDCLTLQLPLTSRTEAIKDDRPEYASIQAILYGPYLLAGHTLGGDWDLKYGANSSDWITPIPASYNSQLVSFSQYFENSTFVLVNSNQSLGMQKLPESGTDLALQATFRLVLNESSSNFSTLADGKNRSVMLEPFDFPGMNVIQQGADKPLLIVDSSNGEPSSVFLVVPGLDGRNETISLESESSQGCYVYSGLSSSAGIKLSCKSDSDATFNQSTSFVSQKGLSQYNPVSFVAKGANRNFLLEPLFSFRDEHYTVYFNITG* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00640 852 Pfam Beta-L-arabinofuranosidase, GH127 113 628 IPR012878 -
Lapu11g00640 852 PANTHER PROLINE-TRNA LIGASE (DUF1680) 17 850 - -
Lapu11g00640 852 SUPERFAMILY Six-hairpin glycosidases 161 438 IPR008928 GO:0005975
Lapu11g00640 852 SUPERFAMILY AbfB domain 750 833 IPR036195 GO:0046373|GO:0046556
Lapu11g00640 852 Gene3D - 710 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00640 Lapu-Chr11 9572543 9578835 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00640 K09955 - gmx:100783150 1484.54