Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00617 ATGTCAATTGTTGGAAGGAACGAGGAGGAGTTCAATCTGTGGGGTGAGTGGGATCCGTTCCTCGATTTTCCTCTCCCTCCTTCCGTCTCCAACTTCTTCCCCGGTTTCCAATTCGGATCCGGGTCGTCGGTGAACACACGTGTGGACTGGAGGGAGACACCCAGGGCGCACGTGTGGAAGGTGGCGCTTCCCGGCTTCACCAACGAAGACGTGCTGGTGGAGCTCCAAGACGAGAGGATGCTGCAAGTGAGCGTGGAGAGTGGGAACTTCATGACCAGGTTCAAGATCCCCGACAGCGCTAACCTCCAACAACTCAAAGCCAACATGCTTCACGAGGTTCTTGTTGTCACTGTTCCCAAGGTTAACCAACCCCTTCCTCCACCTCCTAACAGGAATGTCCGGATCGTTCAAATTGACGGCACCGACTGA 429 0.5501 MSIVGRNEEEFNLWGEWDPFLDFPLPPSVSNFFPGFQFGSGSSVNTRVDWRETPRAHVWKVALPGFTNEDVLVELQDERMLQVSVESGNFMTRFKIPDSANLQQLKANMLHEVLVVTVPKVNQPLPPPPNRNVRIVQIDGTD* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00617 142 Gene3D - 16 138 IPR008978 -
Lapu11g00617 142 SUPERFAMILY HSP20-like chaperones 24 124 IPR008978 -
Lapu11g00617 142 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 39 139 IPR002068 -
Lapu11g00617 142 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 44 124 IPR031107 -
Lapu11g00617 142 Pfam Hsp20/alpha crystallin family 77 138 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00617 Lapu-Chr11 9346041 9346792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00617 K13993 - gmx:100305751 192.971