Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00610 ATGACGCATCGAGTGGACCACGAGTATGACTATCTGTTCAAGATCGTTTTGATCGGAGACTCAGGTGTAGGCAAATCCAACATCCTCTCCAGGTTCACTCGAAATGAGTTCTGCTTGGAGTCCAAATCCACTATCGGAGTCGAGTTCGCCACCAGGACTCTTCAGGTAGAGGGAAAGACTGTGAAAGCACAGATCTGGGACACAGCAGGTCAGGAGCGGTACCGTGCCATTACCAGTGCTTATTACAGAGGAGCTGTAGGTGCTTTACTTGTATATGACATAACTAAGAGACAAACCTTTGACAATGTCCAAAGGTGGTTGCGTGAGCTGAGGGACCATGCGGATTCTAATATAGTTATCATGATGGCTGGAAATAAATCTGATTTGAGCCATCTAAGAGCGGTTTCGGAGGACGATGGTCAAAACTTGGCAGAGAGGGAAGGTCTCTCGTTTCTTGAGACATCTGCACTGGAGGCAACCAACATTGAGAAGGCATTCCAAACCATTTTGACAGAGATTTATCATATTGTTAGCAAAAAGGCACTTGCAGCTCAGGAAGCAGCTGGTGGTACCACACTTCCTGGTCAAGGTACCACCATCAATGTTGGGGATGCATCTGGGAATACAAAGAGAGGCTGCTGCTCCACTTAG 651 0.4716 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSHLRAVSEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAAGGTTLPGQGTTINVGDASGNTKRGCCST* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00610 216 SMART ras_sub_4 10 176 - -
Lapu11g00610 216 SMART arf_sub_2 1 178 - -
Lapu11g00610 216 SMART ran_sub_2 18 200 - -
Lapu11g00610 216 Pfam Ras family 14 174 IPR001806 GO:0003924|GO:0005525
Lapu11g00610 216 SMART rho_sub_3 15 172 IPR001806 GO:0003924|GO:0005525
Lapu11g00610 216 FunFam ras-related protein RABA1f 5 214 - -
Lapu11g00610 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Lapu11g00610 216 Gene3D - 5 214 IPR027417 -
Lapu11g00610 216 ProSiteProfiles small GTPase Rab1 family profile. 8 214 - -
Lapu11g00610 216 PANTHER DRAB11-RELATED 6 203 - -
Lapu11g00610 216 NCBIfam small GTP-binding protein domain 11 170 IPR005225 GO:0005525
Lapu11g00610 216 ProSiteProfiles small GTPase Rho family profile. 6 188 - -
Lapu11g00610 216 CDD Rab11_like 10 174 - -
Lapu11g00610 216 SMART rab_sub_5 13 176 - -
Lapu11g00610 216 PRINTS Transforming protein P21 ras signature 54 76 - -
Lapu11g00610 216 PRINTS Transforming protein P21 ras signature 13 34 - -
Lapu11g00610 216 PRINTS Transforming protein P21 ras signature 151 173 - -
Lapu11g00610 216 PRINTS Transforming protein P21 ras signature 116 129 - -
Lapu11g00610 216 PRINTS Transforming protein P21 ras signature 36 52 - -
Lapu11g00610 216 ProSiteProfiles small GTPase Ras family profile. 1 216 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00610 Lapu-Chr11 9305595 9308101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00610 K07904 - gmx:100799021 420.239