Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00605 ATGGGTGAGACAGACAATGGTAGCAAAAACAGCAGGTGGTGTTTGCAGGGGATGACAGCTCTCGTCACGGGTGGATCCAAAGGAATCGGATATGCTATCGTGGAGGAGTTGGCACAACTTGGGGCCACTGTACACACTTGTGCTCGAAACGAATCTGAACTTAGTGAATCCTTAAACAAATGGACCACGAAAGGATACAGAGTAACTGGTTCGGTCTGTGACGTGGCGTCTCCTGTAGGCAGACAAGAGCTCATAGCTAGAGTCTCCTCTGAGTTTAATGGAAAACTCAATATCCTTGTAAACAATGTGGGAACAAACATAAAGAAACAGACCCAGGATTTTACTGAGGAAGAATTCTCATTTCTGATCAACACAAATCTTACATCTGCTTACCACATAAGCCAACTTGCACATCCCCTCCTGAAAGCTTCAGAGGCTGCAAGCATAATTTTTATATCTTCAGTTGCTGGTGGGGTATCAGTAAATATAGGATCCATTTATGGTGCAACAAAAGGAGCAATTAACCAACTGACTAAAAACTTGGCCTGCGAGTGGGCCAAAGACAACATAAGGACTAACTGCGTCGCCCCAGGGCCAATCAAAACCCCTCTCGGAGACATGCACTATAAAGATGCAAAACTTCTGAATGGTCTCATTTCGAGAACCGTTCTTGGACGGATTGGAGAGGCAGAGGAAGTGTCTTCGTTGGTGGCATTTCTCTGCTTGCCTGCAGCCTCTTACATTACAGGACAAACCATTTATGTTGATGGCGGCTTCACTGCGAACGGCCTCTATATAGAC 801 0.4557 MGETDNGSKNSRWCLQGMTALVTGGSKGIGYAIVEELAQLGATVHTCARNESELSESLNKWTTKGYRVTGSVCDVASPVGRQELIARVSSEFNGKLNILVNNVGTNIKKQTQDFTEEEFSFLINTNLTSAYHISQLAHPLLKASEAASIIFISSVAGGVSVNIGSIYGATKGAINQLTKNLACEWAKDNIRTNCVAPGPIKTPLGDMHYKDAKLLNGLISRTVLGRIGEAEEVSSLVAFLCLPAASYITGQTIYVDGGFTANGLYID 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00605 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Lapu11g00605 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Lapu11g00605 267 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Lapu11g00605 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Lapu11g00605 267 FunFam Short-chain dehydrogenase reductase 6 263 - -
Lapu11g00605 267 PANTHER TROPINONE REDUCTASE 12 263 IPR045000 GO:0016491
Lapu11g00605 267 Gene3D - 3 265 - -
Lapu11g00605 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Lapu11g00605 267 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Lapu11g00605 267 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00605 Lapu-Chr11 9296270 9297768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00605 5 264 Miscellaneous Gene Families AT2G29150 61.923 1.10e-113 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00605 K08081 - gmx:100780806 435.261