Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00603 TCCAAAGGAATCGGACATGCTATCGTGGAGGAGTTGGCACAGCTTGGGGCCACTGTACACACGTGCTCTCGGAACGAAGCTGAACTCAATGAATCCTTACATGAATGGACCACAAAAGGATACAGAGTAACCGGATCATTCTGTGACGTGACGTCTCGTGCAGACATAAAGGAGCCCATAACCAGAATCTCCTCTGAGTTTAATGGCAAACTCAACATCCTTATAAACAATGTGGGGACAAACATATGGAAAGAGCTCCTGGATTACACAGAGGAAGATTTCTCATTTGTGGTGAATACGAATTTGCAATCTGCTTTTCACTTGTGCCAGCTTGCACATCCTCTCCTAAAAGCTTCGGAAGCTGGAAGCATCGTTTTCATATCCTCCATTGGTGGTGTGGTATCAATAAACATAGGATCCGTTGTGTACAGTGCAACAAAAGGAGCAATGAACGAAATGACAAAAAATTTGGCATGTGAATGGGCCAAAGACAAAATAAGGAGTAACTGTGTTGCCCCTGGGGTAATCAGAACCCCTACGGCTGAGGAGTTCTTAAAAGAGGGAAATATAGGAAATGCTTACATTCCGCGAACCCCTCTTGGAAGATTTGGAGAGGGAGAGGAAGTGTCTTCAATGGTGGCATTCCTGTGTCTGCCTGCAGCCTCTTACATAACAGGACAGACTATTTGTGTTGATGGCGGTTTCACTGTGAATGGTCTCTATATAATT 729 0.4458 SKGIGHAIVEELAQLGATVHTCSRNEAELNESLHEWTTKGYRVTGSFCDVTSRADIKEPITRISSEFNGKLNILINNVGTNIWKELLDYTEEDFSFVVNTNLQSAFHLCQLAHPLLKASEAGSIVFISSIGGVVSINIGSVVYSATKGAMNEMTKNLACEWAKDKIRSNCVAPGVIRTPTAEEFLKEGNIGNAYIPRTPLGRFGEGEEVSSMVAFLCLPAASYITGQTICVDGGFTVNGLYII 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00603 243 PANTHER TROPINONE REDUCTASE 2 239 IPR045000 GO:0016491
Lapu11g00603 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 IPR002347 -
Lapu11g00603 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 IPR002347 -
Lapu11g00603 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 IPR002347 -
Lapu11g00603 243 Gene3D - 1 239 - -
Lapu11g00603 243 PRINTS Glucose/ribitol dehydrogenase family signature 69 80 IPR002347 -
Lapu11g00603 243 PRINTS Glucose/ribitol dehydrogenase family signature 164 181 IPR002347 -
Lapu11g00603 243 PRINTS Glucose/ribitol dehydrogenase family signature 143 162 IPR002347 -
Lapu11g00603 243 PRINTS Glucose/ribitol dehydrogenase family signature 116 132 IPR002347 -
Lapu11g00603 243 PRINTS Glucose/ribitol dehydrogenase family signature 199 219 IPR002347 -
Lapu11g00603 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 238 IPR036291 -
Lapu11g00603 243 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 130 158 IPR020904 GO:0016491
Lapu11g00603 243 FunFam Short-chain dehydrogenase reductase 1 239 - -
Lapu11g00603 243 Pfam Enoyl-(Acyl carrier protein) reductase 2 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00603 Lapu-Chr11 9285786 9287148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00603 1 240 Miscellaneous Gene Families AT2G29290 58.750 1.43e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00603 K08081 - gmx:100787037 410.223