Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00600 ATGTCGGGCGGTTTCTTTCGAGGCACATCCGCGGACCAGGACACGCGGTTTTCGAACAAACAAGCGAAGCTGATGAAATCACAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGGTCACCAGAAGGGTGACGGAGCTTCTTGGTTTCGAGGACGAAGTGCTTATTAACTTCATACACAGTCTTCTGGATGCTAAGGAAGTGAACGGGAAGGAAGTTCAAATACAAATTACTGGATTTATGGAAAAAAACACTGGAAAGTTCATGAAAGAACTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTTCTGAAGAAGAAGGCTGAAAATGATCGGATAGCCAGTGAAATTCAGAGGAAGAAGGATAAGGAAGGTAGAGAAATGATGGAAGAGAGGTTTAAGAAACTGGACGGTGGATTTGATTCCAAGGATAATGATACTGCATCAGCTCCAAATTCAAAGTCGAGGGATTCTGGGTATGATCGGGATGGAAAGGAACCTGACAAGAGGAATGGTGTCAGGGAAAGGAGCAGGCTTTCTAGGTCCCCACATTCACCTGCAGTTTCTACTTCACCTCATCGAGGTTCACCCTCAAGGTCAATGAGCAAATCGTTTTCAAATTCCCGAAGTTATTCAGGTGGTAGACACAGGTCAAAGAGTATATCCAGGTCTCCAGCAGCTCGAGGGCGCTCTCTTTCTGCCGAAAAGGTTCACCGATCTCCACGAAGACGATCTATTTCTCCTCATAGGCATTCACCACGACGTTCTCCTCATAGGAGGTCACTTTATTTGAGGAGAAGATCCAGATCTCGCTCAAGTTACAGATCTCCTTCTCCTATACGACGTAGAATGCATTCTCCAGTGCACCGAAGTTCACCTTCTTTTCGACGAAGGAGATCGCCTTCACCAGTACGACGACGGAGGTCACCTTCACCGGTACGACGACGGAGATCACCTTCTCCCATGCGACGACGATGGTCACCTTCACCAGTGCGACGACGCAGATCTCCTTCTCCTGTGAGAAGACATAGATCTCCTTTGGTGCGACGACGTAGATCACCTTCTCCTGGTCGTCGACATAGATCACCTTCTCCTGGTCGCCGTCATAGATCACCTTCTCCTGGTCGTCATCATAGATCACCTTCTCCTAGTCGTCGTCACAGATCACCTTCCCCAGGGCACAAGCATAGATCACCATCACCTCTTGGACTACGGAGATCACCAGGGCACAGACATAGATCGCCATCGCCTCTTGGACTACGGAGATCACCTTCACCTAGACGAAGAAGATCTCCTGTCACTAGGCATGGGCCACCTTCTCCAGTGCGTCGAATTCCACCAACCAGTACACGAAATAGATCGGAATCTCCCATGCAATCTCCCTCCCCAATACAACGAAGGTATGGTAGTAGAACTCCTCCACACTCTTCATCTCCATTGCGACGTAGAGCACCTATTCCTGGTAAGAATAGATCTCCAAGTATCTCTCCCCAGAGGTCTCCTCGAGATGAATGGAGTTCTCAGTCTCCAATGCGACATGTATCAACCTCTCCAATTAGGAAAAATTCTCCAAGACACCAAAGAAGTCCCATGCAGTCTTCTATAAGGAGAGTCAGGAGCATATCTAGTCCTGTGGGGTCTGAACGAAGAGGCAAAGCTTCGAACTATAAATCACAAGAGTCAATGTCCTCTCCTGAGAACTCTCCAAATCGATCTGTATCTGCAGAGGCAAGGAGTGAGACCAGCAGCGAAGGTAGAAGTCCTCACGAAAAGTTATCTAATAAAAGAAGCTTGAGTCCTCTAAAGAAACAAAGAACCCAGAAACCTAGCCATGACAGCCCAGAGACTAGAGATGAAGCAGAAGAAATGCACTATTCCAGAGAAAGGAGAGAGCCTAAAATAATTTCATCCCAAAAGATATCAAAATACTCCCCAGCTAGTAAGAGAAAAGGTTCACCTGCAAAATATGGTCACGAGGATGAGTTCTCTCCTGAAAAGGTTGCAGGTCATCCCGCTTCTGAACATAACAATGATTGGAGTAAGAAAGGCAGGGAGATAAAACGGGATAAGTCTTCTGGAAAACGCAATGAATTTCCTTCTCAACAAAAGCCATCAGTGAACAAGGAAACTTTTTCCAGGGAGAAGCCTCATGAATCTTATGCTGTAGATATTAAAAAATCAAATGACAAGGATCAATCACGTTCAAACTATGCCAAAAGTAGTGATCGGAACCACAAATCTGAAGCCCCTCAAGATTTAGTTGGAAGAGATGATCGTCTCAATCAGAGTGCTTCATATGATTCTATTTCGGAGGAAAGTGGTAAGCATAGACGAGAGGGAAAGGACAGGAGAAAGCATAAAAGGTCTGAGAAAAAATATGCGTCTTCTGATGAAGATTATAGTTATGATTCTGAGTTAGAGGACAGGAAAGAGGCTAAGAAGAGGAGAAAGGAGGAGAAGAAGTTGCGGAAGGAGGATAAGCGTAGAAGGCGGGAAGAGAGGCGTCGCAGAAGGGAAGAACGACGTGCAGAGAAGCTGAAGCTGAAGAGTAAAACAGACAATATTTCAGACAACGAGGAATCTGAACAAGATTATCATCAAAATGATGGTGAAGATACACTATCTGAGCAAAAGAAGCTTGAGATTGAATTACGGAACAAGGCTCTCGAATCACTGAAAGCAAAGAGGGGCATGAATAACTAA 2784 0.4562 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWVTRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAENDRIASEIQRKKDKEGREMMEERFKKLDGGFDSKDNDTASAPNSKSRDSGYDRDGKEPDKRNGVRERSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSKSISRSPAARGRSLSAEKVHRSPRRRSISPHRHSPRRSPHRRSLYLRRRSRSRSSYRSPSPIRRRMHSPVHRSSPSFRRRRSPSPVRRRRSPSPVRRRRSPSPMRRRWSPSPVRRRRSPSPVRRHRSPLVRRRRSPSPGRRHRSPSPGRRHRSPSPGRHHRSPSPSRRHRSPSPGHKHRSPSPLGLRRSPGHRHRSPSPLGLRRSPSPRRRRSPVTRHGPPSPVRRIPPTSTRNRSESPMQSPSPIQRRYGSRTPPHSSSPLRRRAPIPGKNRSPSISPQRSPRDEWSSQSPMRHVSTSPIRKNSPRHQRSPMQSSIRRVRSISSPVGSERRGKASNYKSQESMSSPENSPNRSVSAEARSETSSEGRSPHEKLSNKRSLSPLKKQRTQKPSHDSPETRDEAEEMHYSRERREPKIISSQKISKYSPASKRKGSPAKYGHEDEFSPEKVAGHPASEHNNDWSKKGREIKRDKSSGKRNEFPSQQKPSVNKETFSREKPHESYAVDIKKSNDKDQSRSNYAKSSDRNHKSEAPQDLVGRDDRLNQSASYDSISEESGKHRREGKDRRKHKRSEKKYASSDEDYSYDSELEDRKEAKKRRKEEKKLRKEDKRRRREERRRRREERRAEKLKLKSKTDNISDNEESEQDYHQNDGEDTLSEQKKLEIELRNKALESLKAKRGMNN* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00600 927 Coils Coil 829 876 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 632 663 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 209 254 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 864 906 - -
Lapu11g00600 927 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 478 923 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 735 782 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 609 624 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 183 208 - -
Lapu11g00600 927 Gene3D PWI domain 33 125 - -
Lapu11g00600 927 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lapu11g00600 927 MobiDBLite consensus disorder prediction 679 723 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 518 568 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 847 863 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 269 421 - -
Lapu11g00600 927 Coils Coil 123 143 - -
Lapu11g00600 927 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lapu11g00600 927 MobiDBLite consensus disorder prediction 473 504 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 818 846 - -
Lapu11g00600 927 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Lapu11g00600 927 SMART pwi_2 40 114 IPR002483 GO:0006397
Lapu11g00600 927 MobiDBLite consensus disorder prediction 162 906 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 433 461 - -
Lapu11g00600 927 MobiDBLite consensus disorder prediction 583 608 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00600 K13171 - gmx:100810238 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00600 11 9258580 9271461 Lapu11g00600 11 9258580 9271461 ECH