Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00582 ATGGGCAGCCCCTCGGAGAAGAATGAAAGTAAGGGGTTTTTCGCCGCCATGTCTTCCATGTTCACCAACGCTATGCACCGATCAGTCAACGGACTTCTTGGATATGAAGGTGTGGAAGTCATTAATCCAGAGGGGGGTAAAGAAGATGCAGAAGAGGAAGCACATCGAGGAAGATGGAAACAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAGTATATTGGCTCGGATGTAACATCAATGGTGACACTACCCGTTATTATCTTTGAACCGATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATGAGTCAGAGGATCCATACATGCGGTTAGTTTATGCAACATCATGGGCTATATCTGTGTACTTCGCTTACCAACGAATCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGCTAATCATGGCGGAATTACATTCATTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTGCATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGAGTGACTCTTAAGAGAGATGGTGTAATCTTGGATCTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGTACTTGGATTGATTCGCCTGGGGAAATGATAATGACAAATCTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCTGGTCGATATGAAGTGGATGGATATATTTATAATTCTTCCGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAACGAGTCAATGAGTTATCAACCCTGTGATTCAGAAGGAGAGCCTCTCCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACAGAATGACAAATTTCAGTATACGTATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTAGAGATGGGTGATCTGTCAAAATCTGGGGCAGAAAAGAACAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAGGAAAAAGGGCATAAGTTCATGCCTAGATGGTTTGATTTAACTGAAGAAGTGACAGCAACTCCTTGGGGTGATTTGGAAATCTATCAATACAATGGTAAATACATTGAACATCGGGCTGCTGCAGATAACTCGGGAAGCACTGATGATTTTGATGTTAAAGCAATTGAATTCAATCCATGGCAGTATGGTAATTTGGCCACGGAATGA 1365 0.4271 MGSPSEKNESKGFFAAMSSMFTNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAHRGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAYQRIWKPFNPILGETYEMANHGGITFIAEQVSHHPPMSAGHAENEHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPQNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKNSLEERQRAEKRTREEKGHKFMPRWFDLTEEVTATPWGDLEIYQYNGKYIEHRAAADNSGSTDDFDVKAIEFNPWQYGNLATE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00582 454 Gene3D - 148 325 - -
Lapu11g00582 454 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 424 IPR000648 GO:0008289
Lapu11g00582 454 FunFam oxysterol-binding protein-related protein 3C 148 325 - -
Lapu11g00582 454 FunFam Oxysterol-binding protein-related protein 3C 356 449 - -
Lapu11g00582 454 Gene3D - 356 441 - -
Lapu11g00582 454 MobiDBLite consensus disorder prediction 364 387 - -
Lapu11g00582 454 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
Lapu11g00582 454 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Lapu11g00582 454 MobiDBLite consensus disorder prediction 369 387 - -
Lapu11g00582 454 SUPERFAMILY Oxysterol-binding protein-like 61 436 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00582 Lapu-Chr11 9116624 9121472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00582 - - gmx:100810228 884.789